Magnetospira sp. QH-2: MGMAQ_3046
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Entry
MGMAQ_3046 CDS
T03795
Name
(GenBank) Putative ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
magq
Magnetospira sp. QH-2
Pathway
magq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
magq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGMAQ_3046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
magq03019
]
MGMAQ_3046
Enzymes [BR:
magq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MGMAQ_3046
Messenger RNA biogenesis [BR:
magq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MGMAQ_3046
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
AAA_22
Flavi_DEAD
HEM4
Motif
Other DBs
NCBI-ProteinID:
CCQ74884
UniProt:
W6KCH3
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All DBs
Position
complement(3080394..3081647)
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AA seq
417 aa
AA seq
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MTDFSSLALAQPILRAVADEGYVSATPIQSMAIPSLLEGHDLLGVAQTGTGKTAAFSLPL
LNHLAKNHHKPQRNHPRALILAPTRELAGQIGESLRTYGAHLNLRSTVVFGGTSIRPQIQ
AMNNGVHALVATPGRLLDLMNQRHVKLDQVEVFILDEADRMLDMGFIRDVRKISALLPKK
RQTVLFSATMPKTVQGLADSLLVHPVHVEVAPTATTAERVVQRVLFVPKDKKRALLSELL
NDPDIKRVLVFTRTKHGADRVTKHLNREGVHADAIHGNKAQNARLRALKSFRSGQIRALV
ATDIAARGIDVDGVTHVINFDLPNEPESYVHRIGRTARAGADGVAISFCDHDERAYLRDI
EKTIRKNVPVFEDHPFHTPEIASKPGKTKSRPQQPAKRRPRRRNPQRGKGGAPGKAA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttttccagcctcgccctggcgcagcccattttgcgcgccgtggctgacgaa
ggctatgtttccgccacgcccattcaaagcatggccatcccttcgttgctcgaaggccac
gacttgttgggcgtcgcccagaccggtaccggcaagaccgcggccttctccttgccatta
ttgaaccatttggccaaaaaccaccacaagccgcaacgcaatcatccccgggccttgatc
ctggcaccgacccgcgaactggccgggcagatcggtgagagcctgcggacctatggcgcg
catttgaatctgcgctcgacggtggtgttcggtggtacctccatccggccgcagattcag
gccatgaacaacggcgtgcatgccctggtggccacccccgggcggctgcttgatctgatg
aatcagcgtcatgtgaagcttgatcaagtggaagtgttcatcctcgacgaggccgaccgc
atgctcgacatgggctttatccgcgacgtgcggaagatctctgcccttctgcccaagaag
cgtcagacggtgctgttctcggccaccatgcccaaaacggtgcagggactggccgacagc
cttttggtgcatccggtgcatgtggaggtggccccgaccgccactaccgccgagcgggtg
gtgcaacgggtgctgtttgtgcccaaggacaagaagagagccttgctcagtgagctgctc
aatgatcccgatatcaagcgtgtgctggtctttacccgcaccaagcatggtgccgaccgg
gtgaccaagcacctgaaccgggaaggggtccatgccgacgccatccacggcaacaaggcg
cagaatgcccgcctccgggccctcaaatcctttcgctccgggcagatccgagccctggtg
gccaccgatatcgccgcccgtggcattgatgtggacggggtcacccatgtgatcaatttc
gacctgcccaacgagccggaaagctatgtgcaccgcatcggccgcaccgcccgggccggc
gccgacggggtcgccatttcattctgcgatcacgacgaacgagcctatctgcgcgacatt
gaaaaaaccatccgcaagaatgtgccggtattcgaggatcatccctttcacacccccgaa
atcgccagcaagcccggcaagaccaagagccgcccgcagcaaccggccaagcgccgcccg
cgtcgccgcaatccgcagcggggcaagggaggcgcgccgggcaaggcggcttaa
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