Magnetospirillum sp. XM-1: XM1_4219
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Entry
XM1_4219 CDS
T04231
Name
(GenBank) Putative ribonuclease G and E (RNA-binding protein AU-1/Ribonuclease E/G 138-255)
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
magx
Magnetospirillum sp. XM-1
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
magx03019
]
XM1_4219
03009 Ribosome biogenesis [BR:
magx03009
]
XM1_4219
Messenger RNA biogenesis [BR:
magx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XM1_4219
Ribosome biogenesis [BR:
magx03009
]
Prokaryotic type
rRNA processing factors
XM1_4219
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF3117
Motif
Other DBs
NCBI-ProteinID:
CUW41278
UniProt:
A0A0U5MHX6
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All DBs
Position
I:4202443..4203480
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AA seq
345 aa
AA seq
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MSRESIDILISAGPGEARYLVLADGRPLDLIVDRPTLLQDCVFSGRVTALDKGLDAAFVE
LGRGGRAGFLPGAKALGLSEGAAIVVRVRAEARGGKGPLLSPQEGFAALGEAPTLLHRPD
PLERLRTAFPEARTVPDAHHEVDEALDAALDPVAPLPGGGRLVIEQAAALTAIDVDSAGA
RPAETNAAAVAEIARQLRLRNIGGQVVVDFVSGRDRKPLFRLAEALKQAVGADPTPTHVF
GVSPLGLVELTRERRGPSLGELLCRRALAATPETLALAALRRLLAEALAAPGRILAIRAA
PGVAAALMGLGPERAEAERLLGHSLSISEDAARAPEDVLIEEATR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgggaaagcatcgacatcctcatttccgccggtccgggcgaggcccgctatctg
gtgctggccgacggccgcccccttgacctgatcgtcgaccgtcccaccctgctgcaagat
tgcgtcttcagcggccgggtgacggcgctggacaagggcctggacgccgccttcgtggaa
ttgggccggggcggacgcgccggcttcctgcccggcgccaaggctctgggcctgtccgag
ggcgccgccatcgtcgtccgggtacgggcggaagccaggggcggcaaggggccgctgctg
agcccccaggaaggctttgccgccctgggcgaggccccgaccctgctacaccgtcccgac
ccgctggaacgcctgcgcaccgcctttcctgaagcccgtacggtgccggacgcccaccac
gaggtggacgaggcgctcgacgccgcgctggacccggtggcgcctctgccgggcggcggg
cggctggtcatcgagcaggccgccgcgctcaccgccatcgacgtggattcggccggcgcc
cgtcccgccgagaccaacgcggcggccgtggccgaaatcgcccgccagctgcgcctgcgc
aatatcggcggacaggtggtggtggacttcgtctcgggccgcgataggaagccgctgttc
cgcctggccgaggccttgaaacaggcggtgggcgccgaccccacccccacccatgtgttc
ggcgtgtcgccgctggggctggtggagctgacccgcgagcggcgcgggccgtccttgggc
gaactgctgtgccgccgggccctggccgccacccccgaaaccctggccctggcggccttg
cgccggctgctggccgaggccctggcggcgcctggccggatactcgccatccgcgccgcg
cccggcgtggccgcagccctaatgggccttggccccgagcgggccgaggccgaacgcctg
ctgggccattccctgtccatcagcgaggatgccgcccgcgcgcctgaggacgtgctgatc
gaggaagcgacccgatga
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