Mycolicibacterium aichiense: MAIC_09200
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Entry
MAIC_09200 CDS
T06903
Symbol
ligD_2
Name
(GenBank) multifunctional non-homologous end joining protein LigD
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
maic
Mycolicibacterium aichiense
Pathway
maic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
maic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MAIC_09200 (ligD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maic03400
]
MAIC_09200 (ligD_2)
Enzymes [BR:
maic01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MAIC_09200 (ligD_2)
DNA repair and recombination proteins [BR:
maic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MAIC_09200 (ligD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_C
DNA_ligase_A_M
RNA_ligase
DNA_primase_S
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
BBX06117
LinkDB
All DBs
Position
931829..934075
Genome browser
AA seq
748 aa
AA seq
DB search
MVLTNADKVLYPATGTTKADVFSYYTTIADVMLPHIAGRPVTRKRWPNGVDEPAFFEKQL
ASSAPGWLERATVDHRSGSTTYPIIETPTGLAWIAQQASLEVHVPQWRFTADGKIGPATR
LVFDLDPGEGVSMPQLCEVANAVRELMDDIGLTVYPLTSGSKGLHLYAPLADPVSSSGAV
VVARRVAEQLEKSMPKLVTATMTKSLRAGKIFLDWSQNNGSKTTIAPYSLRGRETPTVAA
PRTWEEIGDPELRHLQYHEVLARVAEQGDLLAGLDDDLPKHDRLTTYRSMRDATKTPEPV
PEATPAVGNNNTFVIQEHHARRLHYDFRLEHDGVLVSWAVPKNLPDTPAVNHLAVHTEDH
PLEYGTFEGEIPKGEYGGGKVIIWDSGTYEAEKFRDSGAEKGGEVIVDLHGQRISGRYAL
IQTKGDQWLAHRMKEQPAPRLQDYSPMLATLGSVEKLTATQYAFEGKFDGYRLLVEVSDG
QLRAQSRSGRDLTADYPQLRALAADLADHDVILDGEVVALDADGVPNFGEMQNRVRASQI
EFWAFDILRLDGRSLLKAKYRDRRKILETFAEGTDLIVPPLLDGDGPEALEFSRTKKWEG
VVAKKWDSTYQPGRRSAAWIKDKNWNTQEAVIGGWREGNGGRSSGIGALLLGIPDDGGLR
FIGRVGTGFSDKELSRLKKILEPLHTDESPFATPLPRLDAKGVTYVRPELVGEVRFGEWT
SDGRLRHPSWRGLRPDKAPGDVELESPI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
gtggtgctcaccaacgccgacaaggtgctgtacccggccaccgggaccaccaaggccgac
gtgttctcctactacacgacgatcgccgacgtgatgctgccgcacatcgccgggcggccc
gttacccgcaaacggtggcccaacggcgtcgacgaacccgcgttcttcgaaaagcagctg
gccagttcggcgccgggctggctcgaacgcgcgacggtggatcaccggtcgggcagcacc
acctacccgatcatcgagaccccgacgggattggcgtggattgcgcagcaggcgtcgctg
gaagtccatgtgccgcaatggcgattcaccgcggacggaaagataggtccggcaacacgt
ttggtgttcgacctcgacccgggcgaaggcgtgagcatgccgcagctgtgcgaggtggcc
aacgccgtacgcgagctgatggacgacatcgggttgacggtctacccgctcaccagcggt
agcaaggggctgcatctgtatgcaccgctggccgatccggtcagcagcagtggagcggtg
gtggtggcccgcagggtggccgaacagctcgagaagagcatgcccaagctcgtcaccgcg
acgatgaccaagagcctgcgggccggcaagatcttcctggactggagtcagaacaacggc
tccaagaccacgatcgcgccgtattcgcttcgcggccgcgagactccgacggtggccgcc
ccgcggacgtgggaggagatcggcgaccccgagctgcgacacctgcagtatcacgaggtg
ctggcgcgggtcgccgagcagggcgatctgctggccgggctggacgatgacctgcccaag
catgaccgcctgaccacgtatcgcagcatgcgcgacgcgaccaagacacccgagccggtg
cccgaggcgacgcctgccgtcggcaacaacaacacgttcgtcatccaagaacaccatgcg
cggcggctgcactacgacttccggctggagcacgacggggtgctggtgtcgtgggcggtg
ccgaagaatctgcccgacaccccggccgtcaatcacctcgccgtccacaccgaggatcac
ccgctggagtacgggacattcgagggcgagatcccgaagggggagtacggcggcggcaag
gtgatcatctgggattccgggacgtatgaggccgagaagttccgagactccggcgcggag
aagggcggcgaggtgatcgtcgacctgcacggccagcgaatctcgggacggtacgccctg
attcagaccaagggtgaccaatggctggcgcaccggatgaaggaacagccggctccgcgg
ttgcaggactattcgccgatgctggccacgctggggtcggtggagaagctgaccgcgacg
cagtacgcattcgagggcaagttcgacgggtaccggttgctggtcgaggtctccgacgga
cagctgcgagcgcagtcgcgcagtggacgggacctgaccgccgactacccgcagttgcgt
gcgctggcagccgatcttgccgatcatgacgtcatcctcgacggcgaggtggtggcactc
gacgccgacggggtgccgaacttcggtgagatgcagaaccgggtgcgcgccagccagatc
gagttctgggcgttcgacattctgcgtctcgacggacgttcactgctgaaggccaagtat
cgcgatcgacgcaagatactcgaaaccttcgccgagggaacggatctcatcgtgccgcca
ttgctcgacggtgacggtccggaagcgctggagttctcccgcacgaagaagtgggaggga
gtcgtcgccaagaagtgggactcgacgtatcagccgggccggcggtcggcggcgtggatc
aaggacaagaactggaacacgcaggaggccgtcatcggcgggtggcgcgagggcaatggc
gggcgttccagcggcatcggcgcgctgctgctgggcatccccgatgacggtggcctgcgg
ttcatcggccgggtgggcaccgggttctccgacaaggagctgtcgcggctcaagaagatc
ctggagccgctgcacaccgacgaatcacccttcgccacaccacttcccagactcgatgcc
aagggggtcacgtatgtgcggcccgagctggtcggtgaggtgcgcttcggcgagtggacc
tccgacggccgattgcgccacccgagttggcgcggcctacggcccgacaaggcgccgggc
gacgtcgagctcgagtcgccgatttaa
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