Monopterus albus (swamp eel): 109953486
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Entry
109953486 CDS
T05607
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03013
Nucleocytoplasmic transport
malb03015
mRNA surveillance pathway
malb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109953486 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
109953486 (eif4a3)
03015 mRNA surveillance pathway
109953486 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109953486 (eif4a3)
03041 Spliceosome [BR:
malb03041
]
109953486 (eif4a3)
03009 Ribosome biogenesis [BR:
malb03009
]
109953486 (eif4a3)
03012 Translation factors [BR:
malb03012
]
109953486 (eif4a3)
Enzymes [BR:
malb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109953486 (eif4a3)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109953486 (eif4a3)
mRNA cycle factors
Stress granule specific factors
109953486 (eif4a3)
Spliceosome [BR:
malb03041
]
Complex C
Other components
EJC/TREX
109953486 (eif4a3)
Ribosome biogenesis [BR:
malb03009
]
Eukaryotic type
90S particles
Helicases
109953486 (eif4a3)
Translation factors [BR:
malb03012
]
Eukaryotic type
Initiation factors
eIF-4
109953486 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
109953486
NCBI-ProteinID:
XP_020444625
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MASVGTQGRKRILKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHTCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgttgggacgcagggcaggaagaggatcctgaaggaggaggacatgaccaag
gtggagtttgagaccagcgaggaggtagacgtcacccccaccttcgacaccatgggcctc
cgagaggacctgctccgcggcatctatgcctacgggtttgagaagccttcggccatccag
cagagagccataaaacaaatcatcaaaggcagagacgtcatcgctcagtctcagtctggg
acaggaaaaacagccaccttttgtgtgtcagtacttcagtgtctcgacatccaggtgagg
gagacccaggcgctgatcctcgctccaaccagagagctggctggacagattcagaaggtg
ctgttggctctgggagactacatgaacgtccagtgtcacacctgcatcggagggaccaat
gtgggagaagacatcaggaagctggactatggtcagcacgtggtggctgggacacctgga
agagtgtttgatatgattcgtcgcaggagtctgaggacgagggccatcaagatgctggtt
ctggacgaggctgatgagatgctcaataaagggtttaaggagcagatctacgacgtgtac
cgttacttgcccccagcaacacaggtggtcctgatcagtgccacactgccacacgagatc
ctggagatgaccaacaagttcatgactgaccccatccgcatcttggtcaaacgcgatgaa
ttgactctggaggggataaagcagttctttgtggctgtggagagagaagagtggaagttc
gacactctttgtgacctatacgacaccctgaccatcacacaggccgtcatcttctgcaac
accaagaggaaggtggattggctgacagagaagatgagagaggccaacttcacggtgtca
tcgatgcacggagacatgcctcagaaagagagggagtccatcatgaaggagttcagatca
ggagccagtcgcgtcctgatttcgaccgatgtttgggctcgaggtttggatgttcctcaa
gtgtctctcatcatcaactatgacctgcccaacaacagagagctctacatccacaggatt
ggtcgatctggccgttatggccgtaaaggtgtggccattaactttgtgaagaatgacgac
atcaggatcctgcgtgacatcgagcagtactactccacccagattgacgagatgcccatg
aacgtggcggacctgatctga
DBGET
integrated database retrieval system
