Monopterus albus (swamp eel): 109955377
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Entry
109955377 CDS
T05607
Symbol
nxf1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03008
Ribosome biogenesis in eukaryotes
malb03013
Nucleocytoplasmic transport
malb03015
mRNA surveillance pathway
malb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109955377 (nxf1)
03015 mRNA surveillance pathway
109955377 (nxf1)
03008 Ribosome biogenesis in eukaryotes
109955377 (nxf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109955377 (nxf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malb03019
]
109955377 (nxf1)
03009 Ribosome biogenesis [BR:
malb03009
]
109955377 (nxf1)
Messenger RNA biogenesis [BR:
malb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109955377 (nxf1)
mRNA cycle factors
Stress granule specific factors
109955377 (nxf1)
Ribosome biogenesis [BR:
malb03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109955377 (nxf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAP_C
Tap-RNA_bind
NTF2
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
109955377
NCBI-ProteinID:
XP_020447150
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MEPAALFPRSYPNLQVVTRVVDNDHGDFMVRREVRSAALSVLREHDDRTTPQFRNRKGRG
PHKGRPYDRSRRDRQRGGFGGPGPRSRLEDIDGDVTMSDSSQDSSYQHRFNPFGRPLRKG
DGRFDRDRRQGKMGGGGGRGGGGGFKGGDRVGGGSMGGGKNRTGWYKVTIPHGRKYEKKS
PVQYHVDHNKVHFYVDDSSAASALHKCSHKISDPDGYKVEVHVNDSAPPSFLPSDLKPEH
LEHLKQCMAKRFDGSQQALDLNNIRTDPDLVSHNIEIVLNWKTNMEAVIKIIEENIPELT
SLNLSNNRIQKLDELAELVTKVPNLKTLNLSHNELKSDRELDKVKGLKLVELWLNKNPLC
NHFKDHASYISAVRQRFPRLLKLDGQDLPPPIGFDVETPTTIPPCKGSSFGSDEFKVLIL
HFLQQYYSIYDSGDRQPLLDAYHDGASLSLTTPYSTQNPSRSSLGEYHKDSRNLKRIKDS
TMRFRLLKHTRLNVVAFLNELPKTQHDIASFTVDVNTYTSTLLSFTVSGVFKEVAVDGKS
RDSTMAFSRVFITVPAGTSGLCIVNDQLFIRMATTEEIRRAFVAPAPTPSSSPVPTLTAP
QQEMLTAFSLKSGMNLEWSQKCLQDNEWDFNRAAHIFTQLKREGQIPDVAFIK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgctgctctttttcctaggagctacccaaaccttcaggtggtgacacgtgta
gtcgataacgaccacggggactttatggtgaggagagaggtcagaagcgctgctttgtcg
gttctacgagagcatgatgatagaaccacaccacagtttcgcaaccgtaaaggcagaggt
cctcacaagggtcggccatatgacaggtcccgcagagaccgccaacggggaggcttcgga
ggtcctggaccacggtctagacttgaagatattgatggagatgtaactatgagtgacagc
tctcaggacagcagctaccagcacagatttaacccatttggaagaccccttcggaaagga
gatggccggtttgacagagacaggcgacaaggcaaaatgggaggcggtggtggcagagga
ggaggaggtggcttcaaaggaggagaccgagttgggggaggcagcatgggaggagggaag
aaccgtacaggctggtacaaagtaacgataccacatggaagaaaatatgaaaagaaatca
cctgtacagtaccatgttgaccataacaaggtccatttctacgtggatgattcctctgct
gccagtgccttgcacaaatgttctcacaagatctcagatccagatggttacaaggtggaa
gtgcatgtcaatgacagtgctccaccatcattccttccgtctgacctgaagcctgagcat
ttggagcacctgaagcaatgcatggcaaaacgttttgatggctctcagcaagcactggac
ttgaacaacattcgaacagacccagatctggtgtcccacaacattgaaattgtcctgaat
tggaagacaaacatggaagctgtcatcaagatcattgaagaaaacattccagagctgacg
agcttgaacctgagtaacaaccgcattcaaaaactggatgaactggctgaattggttacc
aaggtgcccaatctgaagacactcaacctttcccacaatgagctgaaatctgaccgggag
ctggataaggtgaaaggtctgaagctggtggagctgtggctgaacaagaaccctctgtgt
aaccacttcaaggatcatgcctcatacatcagtgctgtgcgtcagaggtttcctcggctt
ctcaaactggatggacaagacctgcccccacccattggatttgatgtggaaacgcccacc
actatccccccgtgcaagggcagcagttttggatcagatgaattcaaggttctcatcctt
cacttcttgcaacagtactacagtatatatgactctggggacagacagccactcctggat
gcttaccatgatggagcatcgttatccctcacaacaccatactccacacagaacccatct
aggagcagtctgggagagtatcacaaagacagtcgaaacctgaagaggatcaaagactcc
acaatgcggtttcggctgctgaagcacacacgactgaacgtggtggcttttctcaacgag
ttgcccaaaacgcagcatgacatcgcctcctttactgtcgatgtaaacacctacactagc
acactactgtcattcacagtgagcggtgtctttaaagaagttgctgttgacggtaaatcc
cgagactcaaccatggccttctctcgcgttttcatcacagtcccagcagggacttctggg
ttgtgcatcgtcaacgaccagcttttcatccgaatggccacaacagaggagattaggcga
gcctttgtggctcctgccccgactccatcttccagccctgtccccaccctcactgcaccg
cagcaggagatgctcacagccttctcactgaagtctggcatgaacctggaatggtcccaa
aagtgtctgcaagacaatgagtgggatttcaacagagcggcacatatcttcactcagtta
aagagggaaggccagattcctgatgttgcattcataaaatga
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integrated database retrieval system
