Monopterus albus (swamp eel): 109955789
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Entry
109955789 CDS
T05607
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
malb
Monopterus albus (swamp eel)
Pathway
malb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
malb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109955789 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
malb03400
]
109955789 (lig4)
Enzymes [BR:
malb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
109955789 (lig4)
DNA repair and recombination proteins [BR:
malb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
109955789 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT_2
DNA_ligase_A_C
BRCT
RNA_ligase
mRNA_cap_enzyme
DUF5803
Motif
Other DBs
NCBI-GeneID:
109955789
NCBI-ProteinID:
XP_020447921
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MEGTSKCDSGEQPSVAAEVPFLHLCTILEKIQKSKLRPEKSKVLGDFIESWRKFHSALHK
DNPETTDSFYPAMRLIVPSFERERMAYGIKESMLAKIYIDVLGLPKNGTEANKLLNYRAP
TTSQGEAGDFAGMAYFVLKKRCTSQGKLSIKEVNDFLDSVAINNASKQKDLVKKSLLHLI
TQSTAFEQKWLIRMILKDMKLGISKETVLQVFHPDAAEFYNVNTDLKKVCQQLHDPSVSL
SEVSIGLFSAFKPMLAAVANIRNVEKQMGNSPFYIETKLDGERIQLHKDGDVYKYFSRNA
FEYTQQFGGSPLEGSLTPYIHNVFKSHIVNCILDGEMMAYNTTTETFMQKGSKFDIKRLM
DDSELQTCFCVFDVLLVNNQKLGKETLKKRHETLQTVFSQVKGRIHLVPKTEARTMREVV
NALNEAIDNREEGIMVKDPLSIYKPDKRGEEWLKIKPEYVDGLMDELDLLIVGGYWGKGK
RGGMMSHFLCAVAEAPKPGEKPSVFHSLCRIGSGYTMKELYDLGLKLAKHWKVYRKNDPP
ASILCGTEKPEVYIEPCNSVIIQVKAAEIVGSDMYKTSCTLRFPRIEKIRDDKEWHQCMT
LAELDEFRSKASGKLASRHLRISDNEPQKKKRKLPVKPKKVVGVIDHFKPQDLSGVTREM
DMFEDVEFCIFNGTEDHPKAELEKGVARCGGIVVQNPGQDTYCVIAGVENMRVKNLIMSN
QHDVVWASWLLECLDQKEVVPWQPRHMIHMSPSTREHFAKEYDGYGDSYFVDTDEQQLRE
VFGRIRTADVSAAMNVSWVEQRYRWDDLPTSMFRPFKVYMDSYDPESAISASCLDIRALE
FRYHGGTVVEKLEEGVSHVIITEETRLLDLRTQRRSFRKKFKIVRDSWVTDSIREGYLLN
DTDYLV
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggagggaacttccaaatgtgactctggtgaacagccttctgttgcagctgaggttcca
ttccttcacctatgcactattttagagaaaatccagaagtctaaactccgtccagagaaa
tccaaagtccttggggattttattgagtcatggagaaagtttcattcagccctccataaa
gacaaccctgagacaacagactctttctacccagctatgcgcctcatagttccctctttt
gaacgagagcgcatggcatatggcatcaaggagagcatgttagcgaaaatctacatcgat
gtattgggcctcccaaagaacggcacggaagcaaataaactgttaaactatcgagctccg
accacatctcaaggagaagccggagactttgctggcatggcgtactttgtgctgaagaaa
cggtgcaccagccaaggaaagctcagcattaaagaagtcaatgactttttggactcagtg
gccatcaacaatgctagcaagcagaaggatcttgtgaagaagagtctgctgcacctcatc
acccagagcacagcttttgagcaaaaatggctcatcagaatgattctaaaggacatgaaa
ctcgggatcagcaaagaaactgttctacaagtcttccacccagatgctgctgagttctac
aatgtcaacacagacttaaaaaaggtgtgccagcagctccacgacccttctgtgtcttta
agtgaagtctctatcggacttttctctgccttcaagccaatgctagcagctgtggctaac
atccgtaatgtggagaaacagatgggcaacagccctttttacattgagaccaagctggat
ggcgagcgtattcagctgcacaaagatggagacgtgtacaaatacttcagtcgaaatgcc
tttgagtacacacagcaatttggaggatccccactggagggctcactgacaccttacatc
cacaatgtttttaaaagtcacattgtgaactgtatccttgatggtgagatgatggcatac
aacacaaccacagagaccttcatgcagaaagggagcaaatttgacatcaagaggctgatg
gatgactctgagttacagacatgcttctgtgtgttcgatgtgctgttggtcaataaccag
aagcttgggaaggaaacactgaagaagcgccacgagaccctgcagactgttttcagccaa
gtcaagggaaggatacatttggtgcctaagactgaagcccgaactatgcgggaggtggta
aatgccctcaatgaagctatagacaacagagaagaggggatcatggtgaaggatccttta
tccatctacaaacctgacaagcgtggtgaggaatggctgaaaataaagccagaatatgtt
gatggcttgatggatgagcttgacctgctgattgttggcggctactgggggaaaggcaaa
aggggtggtatgatgtcccattttctgtgtgctgttgctgaagctccaaagcctggtgag
aagccttcagttttccacagtctttgtcgcataggctctggctacactatgaaggagttg
tatgaccttggcttgaagttagcaaagcactggaaagtctaccggaaaaatgacccacca
gcatccatcctgtgtgggacagagaaaccagaggtctacatcgaaccctgcaactcggtc
atcatccaggtcaaggcagctgaaatagttggaagtgacatgtataaaaccagctgtaca
ctgcgcttccccaggattgagaagatccgagatgacaaggagtggcaccagtgcatgact
ctggcagagctggatgagttccgcagcaaggcgtctgggaaacttgcctcacgccacctt
cgcatcagtgacaatgaaccacaaaagaaaaagcgcaagctaccagtcaaacccaaaaag
gtggtcggggtcattgaccacttcaagcctcaggacctctctggtgttaccagggagatg
gatatgtttgaggacgttgagttctgcatcttcaatggaaccgaggatcaccccaaggct
gagctggaaaagggtgtggccaggtgtggaggtatcgtggttcaaaacccaggacaggac
acctactgcgtgattgcaggtgtggagaacatgcgcgtgaagaacctcattatgtccaac
cagcacgatgtggtgtgggcctcctggctgctggagtgcctggaccaaaaggaagtggtc
ccatggcaaccacgccacatgatccacatgtcaccctccaccagggagcactttgccaag
gagtatgacgggtacggtgacagctactttgtggacacagatgagcagcagctgcgggag
gtgtttgggaggatcaggaccgcagacgtgtcggcagccatgaacgtcagctgggtagag
cagcgttacaggtgggacgacctacccaccagcatgttcagacccttcaaagtttacatg
gacagctatgatcctgaaagcgccatatctgccagctgtttggacatcagggcactggag
tttcgctaccatggaggcacagtagtggagaaattagaggaaggagtctcacatgtgatt
atcacagaagaaaccagactcctggatttaagaactcagcgccgcagctttaggaagaag
tttaagatcgtaagagactcatgggtgactgattcaatcagagaagggtatctgctaaat
gacactgactacttggtttga
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