Candidatus Mycosynbacter amalyticus: GII36_03635
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Entry
GII36_03635 CDS
T08481
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mama
Candidatus Mycosynbacter amalyticus
Pathway
mama03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mama00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GII36_03635 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mama03400
]
GII36_03635 (uvrB)
DNA repair and recombination proteins [BR:
mama03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GII36_03635 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GII36_03635 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
P-loop_SecA
DUF87
SWI2_SNF2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QHN42930
UniProt:
A0A857MQM4
LinkDB
All DBs
Position
complement(664118..666088)
Genome browser
AA seq
656 aa
AA seq
DB search
MSQKFRLETKYQPTGDQPTAIAQLVAGLDQGEREQTLLGVTGSGKTFTMANIIQDRQVPT
LVLAHNKTLAAQLFSEFKTFFPDNEVHYFVSYFDYYQPEAYIASSDTYIEKDSAINEEID
RLRHAATSALLTRRDVIIVASVSCIYGIGSPDAYAEMSIHVARGERRQQDKFIRLLTDIQ
YKRNDVDFHRGTFRVKGDVVDVFPANGETAYRIEFFGDEVDRLTQLDPLTGEILSEPSKV
DIFPSSHYVTPKDRLAHAIEGIKHEFNERMEWFESHDKLLEAQRLAQRTKYDIEMLEETG
FVKGIENYSRYLSDREPGEQPATLIDYFPDDWLLLVDESHQSLPQVRGMYNGDRARKEVL
VEHGFRLPSALDNRPLRFEEFDKHINQAIYVSATPGDYELAHSPEPAQQVIRPTGLLDPP
ITIKPTKGQVDDLIAEIRDRIEKGQRVLVTTLTKRMAEDLSAYLLELNIKTAYIHSEVDT
LERGDILRDLRMGVYDVLVGINLLREGLDLPEVSLVAIMDADKEGFLRSESALIQTIGRA
ARHVDGSVVMYGDKVTRSMQAAIDETDRRREIQEAYNREHGITPRGVDKAIDEGLRAIIP
QKEDKSPKLDLKKIPKDEYANLEKELSAQMNLASANLEFEKAAELRDIIAEIRAKQ
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaatttcgcttggaaactaagtatcagccaaccggcgatcagccgacagct
attgcgcagctggtagcggggcttgatcagggtgagcgcgagcagacactactgggcgtt
actggttctggtaagacgttcacgatggcaaacatcattcaagatcgccaggtgccgacg
ctcgtgttggcgcacaacaagacacttgctgcgcagctgtttagtgaatttaaaactttc
tttccggacaatgaagtacattattttgtcagctacttcgactactatcagccagaggcc
tacatcgccagtagtgacacttatatcgagaaagattcggcgatcaatgaagagatcgac
cggttgcgtcacgctgctacttctgcacttctcacgcgtcgcgatgtgatcatcgtagcc
agcgtgagctgcatatatggtattggaagtccggatgcatatgccgagatgtcgatccat
gtggcgcgtggtgagcgacgacagcaggataagtttattcgcctcctgacagatatccaa
tacaaacgcaacgatgttgattttcatcgtggaacatttcgagtaaaaggagatgtggtt
gatgttttcccggcaaatggcgagacagcatatcgcatcgagtttttcggtgacgaggta
gaccgtctgacgcagctcgatccgctgacaggtgagatactgagtgagccgagtaaggtc
gatatcttcccaagtagtcactatgtaacgccaaaagatagactggcgcatgctattgaa
ggtattaaacatgaattcaatgagcgcatggaatggttcgaatcgcacgacaaactgctt
gaggcgcagcgtctcgcgcagcgtactaagtatgatattgagatgcttgaagaaaccggg
tttgtcaaaggaatcgagaattacagccgatacctgagcgaccgcgagccaggtgagcag
ccagccacgctgatcgattatttcccagatgattggctgctacttgtcgacgaaagccac
cagagcttaccgcaggtgcgaggtatgtataacggagatcgtgcgcgtaaagaggtgcta
gtggagcatggctttcgcttgccaagcgcgctcgacaatcgaccgctgcgattcgaagaa
tttgacaaacatatcaatcaagcgatctatgtgtcggcaacgccgggtgactacgagctc
gcacatagccctgagcctgctcagcaagtgatccgcccaaccgggctgctcgatccgcca
attactatcaaaccgacgaaaggtcaggtagatgatctcatcgccgaaattcgcgatcgt
atcgagaagggacagcgtgtacttgtaacgacactgacaaagcgcatggcagaagatctg
agtgcgtaccttctcgaactgaatattaagacggcctatattcatagtgaagtcgataca
ctagagcgcggtgatattttgcgtgatctgcgtatgggcgtctacgatgtattagtaggt
attaatctcctcagagagggtctggacttgccagaagtaagcctggtggcaattatggat
gcagacaaagagggcttcttgcgcagtgaaagcgcactcatccaaacgattggtcgtgcg
gcgcgccatgtcgacggcagcgtagtgatgtatggtgacaaagtaacgcgctctatgcag
gcagcaatcgacgagacggatcgtcgtcgtgaaattcaggaggcgtacaaccgcgagcac
ggtattacaccgcgtggcgtcgacaaagctattgacgaaggactgcgcgccatcatcccg
caaaaagaagataagtcgccgaaactcgatctgaagaaaataccaaaagatgagtatgca
aatctggagaaagagctatcggcacaaatgaatcttgccagcgcaaatcttgagttcgaa
aaagccgccgagctgcgtgatatcatagccgaaattcgcgctaagcagtag
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