Megalobrama amblycephala (Wuchang bream): 125247040
Help
Entry
125247040 CDS
T08212
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125247040
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125247040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_10
zf-RING_5
U-box
PHP
DUF5446
Motif
Other DBs
NCBI-GeneID:
125247040
NCBI-ProteinID:
XP_048014513
LinkDB
All DBs
Position
LG1:17212139..17218907
Genome browser
AA seq
549 aa
AA seq
DB search
MAEARVSQDEFTCSVCLDLLKDPVTIHCGHSYCKSCITGCWDQEDEKRVYSCPQCTQTFS
PRPALGKNTILADLVEKLKKTKLPADCYAGAGDVQCDVCTGRKHKAVKSCLVCQESFCQT
HFDRHEEYHSRKPHKVIDATGRLQDMICHKHDKELEMYCITDQQCICVWCKEYEHKNHNT
VSTAAQRTEKQKRLKEKQMKIRQRIQQREKDLQQLREAVESHKRSAQTAVEDSERIFTEL
IRSIERSRSEATQRIRDQEKTAVSRAEGRLERLEQEINDLRRRDAELEQLSHTQDHIHFS
FQSLSAPPESTDVNDNPFSSLSSFDGVRESVRQLRDKLEDFCKEELKKISDRVTFTNMNP
KTRNDFLQYSHRITLDLNTVNKYLLLSESNTVITDTNTDQSYPDHPDRFDVYPQVLCRES
VSDRRCYWEIEWSGYVSISVSYKSISRKRRGNECVFGSNDQSWSLYCSSSRYSFYHNKIK
TDLPVKPIISRTVNEENHYRVGVYVDHSAGTLSFYSVSGDTMILIHTVQTTFTQPLYPGF
SFYYPGSSV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagagtttctcaggatgagttcacatgttcagtgtgtctggatctcctg
aaggatccagtgactatccactgtggacacagttactgtaagagctgtattacaggctgc
tgggatcaggaggatgagaagagagtctacagctgccctcagtgcacacagaccttcagt
ccaagacctgctttaggtaaaaacaccattctggctgatctggtggagaaactgaagaag
actaaacttcctgctgactgttacgctggagccggagatgtgcagtgtgacgtctgtact
ggaagaaaacacaaagccgtcaagtcctgtctggtgtgtcaggagtctttctgtcaaact
catttcgaccgtcatgaggaatatcactctcgtaagccacacaaagtgatcgatgccact
ggacgactgcaggacatgatctgccataaacatgataaagagctagaaatgtactgtatc
actgatcaacaatgcatctgtgtgtggtgtaaggagtatgaacataaaaaccacaacact
gtatcaactgcagcacagaggacagagaaacagaaacggctgaaggagaagcagatgaag
atccgtcagaggatccagcagagagagaaagatcttcagcagctgagagaggctgtggag
tctcataagcgctctgcacagacagcagtggaggacagtgagaggatcttcactgagctc
atccgctctatcgagagaagccgctctgaggccacacagcggatcagagatcaggaaaag
actgcagtgagtcgagctgaaggacgactggagcgactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacaggatcacatccatttcagt
ttccagtctctctcagctcctcctgaatctacagacgtaaatgacaatcccttcagttct
ctctcctcttttgatggcgtgagagaatctgtccgtcagctgagagacaaactggaggat
ttctgcaaagaggagctgaagaagatctctgacagagtcacattcaccaacatgaatccc
aagaccaggaacgacttcctacagtattcccatcggatcactctggatctgaacacagtg
aataaatacctccttctgtctgagagcaacacagtgattactgacactaacacagatcag
tcgtatcctgatcatccagacagatttgatgtgtatcctcaggtgttgtgtagagagagt
gtgagtgatcgacgctgttactgggagattgagtggagtggatatgtgtctatatcagtg
tcatataagagcatctccaggaagagacggggtaatgagtgtgtgtttggatctaatgat
cagtcctggagtttgtactgctcttcctccagatactcattctatcacaataagataaag
actgatctccctgtaaagcccatcatcagcagaacagtgaatgaggagaatcactataga
gtaggagtgtatgtggatcacagtgcaggaactctgtccttctacagtgtctctggagac
acaatgatcctcatccacacagtccagaccacattcactcaaccgctctatcctgggttt
agtttttattatcctggatcatcagtg
DBGET
integrated database retrieval system
