Megalobrama amblycephala (Wuchang bream): 125250677
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Entry
125250677 CDS
T08212
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125250677
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125250677
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
U-box
zf-RING_5
Prok-RING_4
IMD
Motif
Other DBs
NCBI-GeneID:
125250677
NCBI-ProteinID:
XP_048019345
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All DBs
Position
LG17:complement(12921667..12925320)
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AA seq
557 aa
AA seq
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MAESSVSLAQDQFNCSICLDLLKDPVTIPCGHSYCMNCITGCWDQDDQKGVYSCPQCRQT
FTPRPVLGKNTMLAEVVEKLKQTKLQAARPVQCYTESGDVECDVCTGDKNKAIKSCLVCL
NSYCQNHLEQHESFFKNKKHNLMDATGRLQEMICPQHEKLLEIFCRSDQHCICYLCTMDE
HKNHDTVSAAAERTEKQRQLEETQRTIQKRIQEKLKELEDLREAVESHKRSAQAAVEDSE
RIFTELIHSIERSRSEVTQLIRDQEKAAVSRAEGRLEQLEQEIDDLRRRDAELEQFSHTD
HHIHFLQSFQSLSFPPGSTDSPSITISFHLSFDDVGKSLSHLREKLEHFCREEIEKISGK
LTYIKIFPTPELKTREEFLQYFRQFTVDINSANKRICLSEGNRVIEYTDTVQPYPDHPDR
FDDLFQVLCRESVCGRCYWEVEWSGKVGISVSYRSISRKGQENKCGFGHNIQSWRLFCSS
STCSFRYNNKKTKLPVEVSSSCRIGVYVDHSAGTLSFYSVSDTMTLIHRVHTTFTQPLYP
GFRVYDSFGSHISKVKL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatccagtgtttctttggctcaggatcagttcaactgttcaatctgtctggat
ctactgaaggatccagtgaccattccctgtggacacagttactgtatgaactgtattaca
ggctgctgggatcaggatgatcagaagggagtctacagctgtcctcagtgcagacagacc
ttcactccaagacctgttttaggtaaaaacaccatgctggctgaagtggtggagaaactc
aagcagacaaaactacaagctgctcgtcctgttcaatgttacactgaatctggagatgtg
gagtgtgacgtctgtactggggacaaaaacaaagccatcaagtcctgtctggtgtgtctg
aactcttactgtcaaaatcatctggaacaacatgagagtttcttcaaaaataaaaaacac
aatctgatggatgccactggacgactgcaggagatgatctgccctcaacatgagaaactg
ctggagattttttgtcgttctgatcaacactgtatatgttatctgtgtacaatggatgaa
cacaaaaaccacgacactgtatcagctgcagcagagaggactgagaaacagagacagtta
gaggagacacagagaacaatccagaagagaatccaggagaaactgaaggagcttgaggat
ctgagagaggctgtggagtctcacaagcgctctgcacaggcagcagtggaggacagtgag
aggatctttactgagctgatccactccattgagagaagccgctctgaggtgacacagctg
atcagagatcaggaaaaggctgcagtgagtcgagctgaaggacgactggagcaactggag
caggagattgatgatctgaggaggagagatgctgagttggagcagttttcacacacagac
catcacatccatttcctccagagtttccagtctctctcttttcctcctggatctacagac
tcacccagcatcactatcagttttcatctctcttttgatgatgttggtaaatctctatct
catctgagagagaaactggagcatttctgcagagaggagatagaaaagatatctggtaaa
ttaacatacattaagatctttcccacacctgagctcaagaccagggaggaatttttacaa
tatttccgtcagttcactgtggacataaattcagcgaataaaagaatttgtctgtctgaa
gggaacagagtgattgaatacactgacacagttcagccgtatcctgatcatccagacaga
tttgatgatttgtttcaggtgttgtgtagagagagtgtgtgtggacgctgttactgggag
gttgagtggagtggtaaggtaggtatatcagtgtcatataggagcatcagcaggaaggga
caggaaaataaatgtggttttggacacaacattcagtcttggagattattttgctcttcc
tccacatgttcattccggtacaacaataaaaagactaaactccctgtagaagtttccagc
tcgtgtagaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtc
tctgacacaatgaccctcattcacagagtccacaccacattcactcagcctctctatcct
gggtttagagtttatgattcatttggatcacatatttcaaaagtaaaactgtga
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