Megalobrama amblycephala (Wuchang bream): 125250678
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Entry
125250678 CDS
T08212
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125250678
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125250678
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
U-box
MRP-S31
DUF3829
Relaxase_C
DUF5446
Motif
Other DBs
NCBI-GeneID:
125250678
NCBI-ProteinID:
XP_048019346
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Position
LG17:complement(12454285..12465552)
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AA seq
563 aa
AA seq
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MADDSILWSQEQFNCSICLDLLKDPVTIPCGHSYCMNCITGCWDQDDQKRVYSCPQCRQT
FTPRPVLGKSTMLVELVEKLKKAKLQAARPVQCYTESGDVECDVCTGDKNKAIKSCLVCL
NSYCQNHLEQHESFFKNKKHNLIDATGRLQEMICPQHQKLLEIFCRTDQNCICYLCMVDK
HKNHDTVSAAAERTEKQVVESGSKLGEMQRKFQQRIQERQKELEDLREAVESHKRSAQAA
AEDSERIFTELIRSIERSRSEVTQLIRDQEKTAVSRAEEILEQLEQEIDDLRRRDAELEQ
LSHTDHHIHFLQSFRSLSVPPGSTDSSRITVSSRLSFDDVGKSVSQLREKLEHFCREEIE
KISGRVTYIVIIPTPEPKTREDFLQYSHQLTLDLNTVNKNLLLSEGNRVIKYTDTVQPYP
DHPDRFDSRCQVLCRESVCGRCYWEAEWSGKVGLSVSYKSISRKGQRIESEFGRNDQSWC
LFYSDSSCSFWHNNKHTSLPVVSSSCRIGVYVDHSAGTLSFYSVSDTMTLIHRVHTTFTQ
PLYGGFEFSSVWKSGSRVKLYKL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacagcattttatggtctcaggaacaatttaactgttcaatctgtctggat
ctactgaaggatccagtgaccattccctgtggacacagttactgtatgaactgtattaca
ggctgctgggatcaggatgatcagaagagagtctacagctgtcctcagtgcagacagacc
ttcactccaagacctgttttaggtaaaagcaccatgctggttgaactggtggagaaactc
aagaaggcaaaactacaagctgctcgtcctgttcaatgttacactgaatctggagatgtg
gagtgtgacgtctgtactggagacaaaaacaaagccatcaagtcctgtctggtgtgtctg
aactcttactgtcaaaatcatcttgaacaacatgagagtttcttcaaaaataaaaaacac
aatctaatagatgccactggacgactgcaggagatgatctgccctcaacatcagaaactg
ctggagattttctgtcgtactgatcagaactgtatttgttatctgtgtatggtggataaa
cacaaaaaccacgacactgtatcagctgcagcagagaggactgagaaacaggtagtggag
agtgggagtaaattgggtgagatgcagagaaaattccagcagagaatccaggagagacag
aaggagcttgaggatctgagagaggctgtggagtctcacaagcgctctgcacaggcagca
gcggaggacagtgagaggatctttactgaactgatccgctccattgagagaagccgctct
gaggtgacacagctgatcagagatcaggaaaagactgcagtgagtcgagctgaagaaata
ctggagcaactggagcaggagattgatgatctgaggaggagagatgctgaactggagcag
ctttcacacacagaccatcacatccatttcctccagagtttccggtctctctctgttcct
cctggatctacagattcatccagaatcactgtcagttctcgtctctcttttgatgatgtt
ggtaaatctgtgtctcaactgagagagaaactggagcatttctgcagagaggagatagaa
aagatatctggcagagtaacatacattgtgattattcctacccctgaacccaagaccagg
gaggatttccttcaatattcacatcaactcactttggatttaaacacagtgaataaaaat
ctccttctgtctgaggggaacagagtgattaaatacactgacacagtccagccgtatcct
gatcatccagacagatttgatagtcgttgtcaggttttgtgtagagagagtgtgtgtgga
cgctgttactgggaggctgagtggagtggtaaagtgggtttatcagtgtcatataagagc
atcagcaggaagggacagagaattgaatctgagtttggacgtaatgatcagtcctggtgt
ttgttctactctgactccagttgttcattctggcacaataacaaacatacatcactccct
gtagtctccagctcctgtagaataggagtgtatgtggatcacagtgcaggaactctgtcc
ttctacagcgtctctgacacaatgaccctcattcacagagtccacaccacattcactcag
cctctctatggtgggtttgagttcagttcagtgtggaaaagtggatcaagagttaaactg
tataaattataa
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