Megalobrama amblycephala (Wuchang bream): 125252945
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Entry
125252945 CDS
T08212
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125252945 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125252945 (ddx46)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125252945 (ddx46)
Spliceosome [BR:
mamb03041
]
Complex A
U2 snRNP components
U2 related factors
125252945 (ddx46)
Complex B
125252945 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
125252945
NCBI-ProteinID:
XP_048022593
LinkDB
All DBs
Position
LG18:complement(2761156..2778622)
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AA seq
1037 aa
AA seq
DB search
MGRESRHYRKRSSSRARSGSRSKSRSPDSKRSKKDERAGSRTRERSRRERTRSRERRRSR
SRDRKRPRRSRSRDRRRASRERRRSKSRSRGRSKEKSENGEQSADKKKVKEEKEKEEEKA
EDQDFDQNTLEEEMRKRKERVEKWREEQRKKAMENIGEIKKELEEMKQGKKWSLEDDDDD
DEETQAPAEPDEDEQEKDAAAEAEEAALMEEETGEELDPLDAYMEEVKEEVKKFNMGTMK
GGNDKHKGGMSVTKVVTVVKTKKMLHSSKKKGELMENDQDAMEYSSEEEVVDLQTALTGF
QTKQRKVLEPVDHQKIEYESFRKNFYVEVPELARMTPEEVNEYRLELEGIIVKGKGCPKP
IKTWVQCGISMKVLNAMKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM
FRHILDQRPLGEGEGPIAVIMTPTRELALQITKECKKFSKSLGLRVVCVYGGTGISEQIA
ELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRATYVVMDEADRMFDMGFEPQVMRIVDNV
RPDRQTVMFSATFPRTMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLL
EILGHYQEKGSVIIFVDKQEHADSLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGAC
RLLVATSVAARGLDVKHLILVVNYNCPNHYEDYVHRAGRTGRAGNKGFAYTFITADQVRY
SGDIIKALELSGSPVPPELEQLWTGFKEQQKAEGKSIRSSSGFSGKGFKFDETEHALANE
RKKLQKAALGLHDSDDDDAALDIDEQIESMFNSKKRVKDFSAPGGATGGGSGGVSGTVTA
VSGLSTPSAGNIQKLEIAKKLAARIQVQKNLGAEAQDVMQQATNAILRGGTMIAPSVSAK
TIAEQQAEKINAKLNYTPVEKLEEDRQAAEAAETVKRYEEELEINDFPQTARWKVTSKEA
LQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELI
RLQNSYQPTSKGRYKVL
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagagtcacggcactacaggaagcgctccagctcgagggcgaggtcaggcagc
aggtctaagagccggtcgccggactccaaacgctccaagaaagatgagcgggccggatca
cgcacccgggagcgcagccggagggaacgcacacgcagcagagagcgccggagatcccgc
tccagagaccgcaagagacccagacgctccaggagtcgggacaggagacgcgcgagccga
gagcgccggaggagcaagagcaggagcagagggaggagcaaggagaagtcggagaacgga
gagcagtcagctgacaagaagaaggtgaaggaggagaaggagaaggaggaggagaaggct
gaagaccaagacttcgaccagaacaccctggaggaggagatgaggaagaggaaagagcgg
gtggagaagtggagggaggagcagaggaagaaagccatggagaacatcggcgagatcaag
aaagagctggaggagatgaagcagggcaagaagtggagtctggaggatgatgacgatgat
gacgaagagactcaagcgcccgcggagccggacgaggacgagcaggagaaagacgcagcg
gccgaggcggaggaggctgcgctcatggaggaggagaccggagaggagctcgaccctctg
gacgcctacatggaggaggtcaaagaagaggtcaagaagttcaacatgggcaccatgaaa
ggaggaaacgacaagcataaaggaggcatgtctgtgaccaaagtggtgacggtcgtgaaa
accaagaagatgctgcactcctccaagaagaaaggagagctgatggagaacgatcaggac
gccatggagtactcatcagaggaagaggtcgtggacctgcagacggctctcacaggcttt
cagaccaaacagaggaaagttctggagcctgtggatcatcagaagatcgaatatgaatcc
ttccgcaagaacttctacgtggaggtgccggagctggctcggatgacccctgaagaggtg
aatgaataccgtctggagctggagggaatcatcgtcaaagggaaagggtgtccgaagccc
atcaagacatgggtgcagtgtgggatatccatgaaggtgctgaacgcaatgaagaaacac
aactatgagaagccgaccccgatccaagcccaggccattccggccatcatgtcgggacgt
gatctcattggcatcgctaaaacaggaagcggaaagaccatcgccttcctgctgccgatg
ttccggcacatattagaccagcggccgttaggagagggagaaggacccatcgccgtgatc
atgaccccgacgcgagagctggctctgcagatcaccaaagagtgcaagaagttctccaag
tctctgggtctgcgtgtggtgtgtgtgtacggaggcacgggcatcagcgagcagatcgcg
gagttgaagcgaggcgcagaaatcatagtgtgcactcctggacgaatgatcgacatgttg
ggcgccaacagcggtcgagtgaccaacctgcgcagagctacgtatgtggtgatggacgaa
gctgaccggatgttcgatatgggctttgaaccgcaggtgatgcgtatcgtggataatgtc
aggcccgaccggcagaccgtcatgttttccgccacatttccgcggacgatggaggccttg
gcccgcaggatcctgtccaagcccatcgaggtgcaggtgggcggcaggagtgtggtgtgt
tcagacgtggagcagcacgtgattgtgatcgaggaggagaagaagttcctgaagctgctg
gagattctgggtcactatcaggagaagggatccgtcatcatcttcgtggacaagcaggag
cacgctgacagcctcctgaaggacctgatgaaggcctcgtacccctgcatgtcgctgcac
ggaggcattgaccagtacgacagggacagcatcatcaacgacttcaagaacggagcctgt
cggctgctggtggccacctccgtcgccgcacgaggcctggacgtcaagcacctcatcctg
gtggtcaactacaactgccccaaccactatgaggactacgtgcaccgcgccggacgcacg
ggacgagccggcaacaagggtttcgcgtacacgttcatcactgcagaccaggtgcggtac
tccggcgacatcatcaaagccctggagctgtccggatcgcccgttccccccgagctcgag
cagctgtggaccggcttcaaggagcaacagaaagctgagggcaagagcatcaggagcagc
agcggattctccgggaagggcttcaagttcgacgagaccgaacatgcgctcgccaacgag
aggaagaagctgcagaaagctgcgttgggtctgcatgactctgatgatgatgacgcggct
ctggacatcgacgagcagatcgagagcatgttcaactctaagaagcgtgtgaaggacttc
tcggccccgggcggcgccacaggaggaggttctggtggcgtgagcggaaccgtgacagcc
gtctctggcctgagcactccctctgctggaaacatccagaaactggagatcgccaagaaa
ctggcggccaggatacaggtgcagaagaatctgggcgccgaggcgcaggatgtgatgcag
caggcgacaaatgccattttgcgcggcgggacaatgatcgcgccctcggtctcggccaag
accatcgcggagcagcaggcggagaagatcaacgctaaactcaactacacgcctgtagag
aagctggaggaggaccgacaggccgcagaggccgccgaaaccgtcaagagatacgaggag
gagttagagatcaacgacttccctcagacggcccgatggaaggtgacgtcgaaggaggcc
cttcagcgcatcggcgagtattcagaggccgccatcaccatacgaggaacctacttcccc
ccgggcaaagagcccaaagagggcgagcgcaagatctacctggccatcgagagtgcgaac
gaactggccgtgcagaaggccaaagcagagatcacacgcctcatcaaagaggaactcatc
cgcctgcaaaactcgtaccagccgaccagcaaaggccgatacaaggttctgtag
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integrated database retrieval system
