Megalobrama amblycephala (Wuchang bream): 125255396
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Entry
125255396 CDS
T08212
Symbol
pcgf5b
Name
(RefSeq) polycomb group RING finger protein 5-B isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125255396 (pcgf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125255396 (pcgf5b)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
125255396 (pcgf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-RING_10
zf-Nse
zf-rbx1
zf-C3HC4_3
Actin_micro
zf-RING_6
TRAF3_RING
zf-C3HC4_5
DUF1272
Motif
Other DBs
NCBI-GeneID:
125255396
NCBI-ProteinID:
XP_048026552
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All DBs
Position
LG20:13822138..13841734
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AA seq
265 aa
AA seq
DB search
MTSHRKHLVRDFNHFITCYVCKGYLIKPTTVTECLHTFCKSCIVQHFEDSNDCPKCGIQV
HETNPLEMLRLDNTLEEVIFKLVPGLREKEQQQEVEFWRRNKSKENPDEDGPICKKARVD
EEDDDKGDGDYHRSDPQIAICLDCLRNNGQMGENIVKGLMKKFIRCSTRVTVGTIKKFLS
LKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGENFEAGFSERLKIKDDAVETTL
DQTVMSQHTSVYPMVLEYRPRIDFG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacataggaaacacctggtgagggacttcaaccatttcatcacctgttatgtc
tgtaaagggtacctgatcaagcccaccaccgtgacagagtgcctgcacaccttttgtaaa
agctgtatagtccagcattttgaggacagcaatgattgcccaaaatgtggtatccaggtt
catgaaacgaatcccttggagatgttaaggctggacaacactctagaagaagtcatattc
aaacttgtgcctggtcttagagaaaaggaacagcagcaagaagttgaattttggagaaga
aacaaatcgaaagaaaatcctgatgaggatggccctatatgtaagaaagcccgagtagat
gaagaggatgatgataaaggtgatggagactaccacaggagtgatcctcagatagccatc
tgtctagactgcttgcgtaacaatgggcagatgggagagaacattgttaagggtttaatg
aaaaaatttattcgctgctcaacaagagtgactgttggaacaattaagaagtttttaagt
ctgaagttaaagcttcccagttcttacgagctagacgttctatgcaatggtgagatcatg
ggtaaagaccacaccatggaattcatctacatgacccgctggaggcttcggggagaaaat
ttcgaggcaggcttttcagagagactgaaaataaaagatgatgcagtggaaactacattg
gatcagacagtaatgtcgcaacacacaagtgtatacccaatggtacttgaatatcgacca
cgcattgactttggctag
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