Megalobrama amblycephala (Wuchang bream): 125264973
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Entry
125264973 CDS
T08212
Symbol
shrprbck1r
Name
(RefSeq) LOW QUALITY PROTEIN: ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04217
Necroptosis
mamb04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125264973 (shrprbck1r)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125264973 (shrprbck1r)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125264973 (shrprbck1r)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
125264973 (shrprbck1r)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
125264973 (shrprbck1r)
Multi subunit Ring-finger type E3
LUBAC complex
125264973 (shrprbck1r)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
zf-RanBP
zf-RING_2
IBR
zf-RING_5
ubiquitin
Motif
Other DBs
NCBI-GeneID:
125264973
NCBI-ProteinID:
XP_048040770
LinkDB
All DBs
Position
LG3:28061928..28077550
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AA seq
717 aa
AA seq
DB search
MSLSSGGWTHTPPPAQSSSSHLGHEASQSACSTVLMSVKVSVCHSGIRPLCLPGAGDESL
RLQLSMDPGKAGEFRLALRDVSGTTAGRSVSIAEFDLKTVRYEVKSPQCHELSLVTPPHD
RITFNFRCEQEAQEWATVVMSSLREAHRVAINSSTEEGKLPPQPLDSQSNAPMPCTEEIC
AELVSAIEAGDVRAASVCASSLAKQKAALSIQPSKHNYTDTEISLAVVVEDASSSCCVTV
NVFPHSTIGALKQQVFTDYGFHPRVQRWVIGQSLCSDHRSLASYGVQRDGDTAFLYLVSA
RQARLSRGLYQQDQESALLMPALAPTSNQPHQEVVPNGPAALNTASRPYSTLPTRLHSSH
NTLTNSAGGTERLGLSDIRDLINLELPQLNEALAPNRTSTQLGWACPTCTYINKPTRPGC
EMCSADRPESYTVPGNYRPDALELRRIQKEKEAIRQYQQAREAERRENFARLVQMDGQDL
IPNPERVECRICYVELESGEGVLLRECLHCFCKECLRSVILMSEDPQVACPYRDEAYACD
CILQEREIRALVSVDDYERWLQRGLSVAESRCEGSYHCATADCPGWCVYEDTVNTFXCPV
CKKHNCLLCKAIHEGMNCKQYQDDLAARAINDSAARRTRDLLKTLVNSGEAMHCPQCGII
VQKKEGCDWLRCTVCHTEICWVTRGPRWGPKGPGDTSGGCRCNVNKQRCHPKCQNCH
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgagctcaggcgggtggactcacacacctccgccggcccagtcttcatcgtct
catctcggccacgaggcctcgcagtcggcctgcagcactgttttgatgtcagtgaaggtg
tcagtatgccactctggtatacgacctctttgtctcccgggcgccggagacgaatctctc
cgtcttcagctgagcatggacccggggaaggcaggggaattccgccttgcgttacgggac
gtcagcggaacaacggctggacgcagtgtgtccattgctgagtttgacctcaagactgtt
cgctatgaagtcaagtccccacagtgccatgaactgagtttggtaacacccccacacgac
cgtatcactttcaacttccgctgtgagcaggaagcacaggagtgggccactgtagtgatg
tcatcactccgtgaagcgcatagagtggcgattaattcatccactgaagaaggaaagcta
ccaccccagcctttggattcacagagcaatgcacccatgccatgtacagaggagatatgt
gcggagctggttagcgcaatagaggcaggtgatgttcgggcggcatctgtctgtgcatca
tctttagctaaacagaaagctgctctgagcattcagccctctaaacataattacactgac
actgaaattagcctagctgtggtggtagaggatgcatcctcttcctgttgtgtcacagtg
aacgtcttcccccactccacaattggtgctctcaaacagcaggtcttcacagactatggt
tttcatccacgagtgcagcgctgggtcattggccagtctttgtgctctgatcatcgctct
ctggcttcttatggagttcagcgagatggcgacactgcgttcctttatctcgtttctgcc
cgtcaggctcgactcagtcgagggctgtaccaacaagatcaggaaagtgctttactcatg
ccagctttggcgccaacgtctaatcagcctcaccaagaagtggtacccaatgggccagca
gctctgaacacagcctcaaggccatacagcaccctgcctacgagacttcatagcagccat
aatactctgaccaacagtgctggagggacagagaggttgggattgagtgatatccgtgac
ctgatcaaccttgagctgccgcagttgaatgaagccctggcgcccaacagaacaagcaca
cagctgggatgggcctgcccaacctgtacatatattaataaaccgacacgtcccggctgt
gaaatgtgtagcgcagacagacctgaaagctacactgttcccggcaactacagaccagat
gctctggagctacgacgcattcagaaggaaaaagaagcaataagacagtaccaacaggcc
agagaagcagagcgcagggaaaactttgcacgtctggtgcagatggacggacaggatctg
attcctaacccagagagagtggagtgcaggatctgctacgtggagcttgagtctggtgag
ggagtcctgctccgagagtgtctccactgcttctgcaaagagtgtctgcgctctgtgatt
ctgatgtcagaggaccctcaggtggcatgtccatacagagacgaggcctacgcctgtgac
tgcatcttgcaagaaagagaaatcagagctctggtgtcagtagacgattatgagcgctgg
ttgcagaggggtctgtctgttgcagagtctcgatgtgagggcagttatcactgtgctact
gcagactgcccaggctggtgtgtttatgaagatacggtcaacactttcnactgcccagtg
tgcaaaaaacacaactgcctgctctgcaaggccattcatgaagggatgaactgtaagcaa
tatcaggatgatctagcagctcgcgctatcaatgattccgcagctcgaagaaccagagac
ctgctcaagactcttgttaattctggagaggcgatgcattgccctcagtgcggtatcatt
gtgcagaagaaagagggctgtgattggctccgctgtactgtctgccacaccgagatctgc
tgggtcaccagagggccacgctgggggcctaaaggtcctggagacacaagtggaggctgc
cgctgcaatgtcaacaaacagagatgccacccaaaatgtcaaaattgtcactaa
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