Megalobrama amblycephala (Wuchang bream): 125264982
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Entry
125264982 CDS
T08212
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125264982
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125264982
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_6
PHP
DUF6377
DUF4407
Motif
Other DBs
NCBI-GeneID:
125264982
NCBI-ProteinID:
XP_048040793
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Position
LG1:18203369..18210486
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AA seq
542 aa
AA seq
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MAEARISQDEFTCPVCLDLLKDPVAIPCGHSYCMCCITDCWDQEDEKRVYSCPQCRQTFS
TRPALGKNTILAEMVEKLKKTKLPADCYAGAGDVQCDVCTGRKYKAVKSCLVCLESFCQT
HFDRHEEYHSRKPHKVIDATGRLQDMICRKHDKELEMYCITDQQCICVWCKESEHKNHNT
VSTAAQRTEKQKQLKETQMKIRQRIQQRQKDLQQLREAVESHKRSAQTAVEDSERIFTEL
IRFIERSCSEVTQLIRDQEEAAVSRAEGQLERLEQEINDLKRRDAELEQLSHTHDHIHFL
QSFQSLSAPPESTDKPDDPFSSLFSFDGMRESVHQLRDKLEDLCKEEIKKISDRVTFTNM
NPKTRNDFLQYSHQLTLDANTAHKQLCLSEKNIVITKTDTVQPYPDHPDRFDYYYQVLSR
ESVSGCCYWEIEWSGSVSISVSYKSISRKGSGIECGFGYNDQSWSLDCSSSSYSFWLNNI
HTDLPVKSFSGRIGVYVDHSAGTLSFYSVSDTMNLIHTVQTTFTQPLYPGFWVDSGSSVK
LC
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccaggatttctcaggatgagttcacatgtccagtttgtctggatctcctg
aaggatccagtggccattccctgtggacacagttactgtatgtgctgtattacagactgc
tgggatcaggaggatgagaagagagtctacagctgtcctcagtgcagacagaccttcagt
acaagacctgctttaggtaaaaacaccattctggctgaaatggtggagaaactgaagaag
actaaacttcctgctgactgttacgctggagctggagacgtgcagtgtgacgtctgtact
ggaagaaaatacaaagctgtcaagtcctgtctggtgtgtctggagtctttctgtcagact
cattttgaccgtcatgaggaatatcactctcgtaaaccacacaaagtgattgatgccact
ggacgactgcaggacatgatctgccgtaaacatgataaagagctagaaatgtactgtatc
actgatcaacaatgcatctgtgtgtggtgtaaagagtctgaacataaaaaccacaacact
gtatcaactgcagcacagaggacagagaaacagaaacagctgaaggagacgcagatgaag
atccgtcagagaatccagcagagacagaaagatcttcagcagctgagagaggctgtggag
tctcataagcgctctgcacagacagcagtggaggacagtgagaggatctttactgagctc
atccgcttcattgagagaagctgctctgaggtcacacagctgatcagagatcaggaagag
gctgcagtgagtcgagctgaaggacaactggagcgactggagcaggagatcaatgatctg
aagaggagagatgctgagctggagcagctttcacacacacatgatcacatccatttcctg
cagagtttccagtctctctcagcacctcctgaatctacagacaaacctgacgatcccttc
agttctctcttctcttttgatggcatgagagaatcagtccatcagctgagagacaaactg
gaggatttgtgcaaagaggagatcaagaagatctctgacagagtcacattcaccaacatg
aatcccaagaccaggaacgacttcctacagtattcccatcagctcactctggatgcaaac
acagcacataaacagctctgtctgtctgagaagaacatagtgattactaaaactgacaca
gtccagccgtatcctgatcatccagacagatttgattattattatcaggtgttgagtaga
gagagtgtgagtggatgttgttactgggagattgagtggagtgggagtgtgtctatatca
gtgtcatataagagcatcagcaggaagggatcgggtattgagtgtggatttggatataat
gatcagtcctggagtttggactgctcttcctccagttactcattctggctcaataacata
cacactgatctccctgtaaagtccttcagtggtagaataggagtgtatgtggatcacagt
gcaggaactctgtccttctacagcgtctctgacacaatgaacctcatccacacagtccag
accacattcactcagccgctctatcctgggttttgggttgattctggatcatcagtgaaa
ctgtgttga
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