Megalobrama amblycephala (Wuchang bream): 125265680
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Entry
125265680 CDS
T08212
Symbol
frem1a
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125265680 (frem1a)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
125265680
NCBI-ProteinID:
XP_048041998
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All DBs
Position
LG3:complement(53040199..53088559)
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AA seq
2168 aa
AA seq
DB search
MTAIDRTYLPFLLMGLLHQIQGSLVKTNLGVKVKRGQSVFLQEGDLQFHIPRDKDACKLE
VVLNEPITQRVGTLSPQVFDCHFLADEVKYTHNGCPILKEDTVKLRLYRFTETETYSELF
SLSVEIMEPDCNVIRFGSQNLEVPEFYGLSNILDGNVVSFHYEHRHNIECTVRVSTLETH
LPVHGQLVTGEPEKPEGPRGDEPDSFVPLRRQLDNKARAHCKSDDCLKGLKLLKITKVPC
NDFLMMGIRYQHIDPPSPDIDYIAIRLDLTDTRSRSIIQSEQAWIPVTIKGAMPNQPPKP
AFMSMFILEVDQFILTPLSTATLDAEDEETPKQRLVFNITNPPNEGFITHLSDHTKPISS
FTWMDLNDMLISYQPPNSSHTQRRNYEVEFEVHDFYFEKSQPVMVHVSIRTADTNAPRVS
WNMGLSLLEGQSRPITWDQLQIVDNDNLKAVKIITVDGLQHGRLTVRGGKGFMFTVNDIK
DGAVHYHHDDSDTTKDYIVFRITDGLHQTRHKFPINVLPKDDSPPFLITNMVLELSEGQT
GLLRGSILQACDMDSSDDYIMFNITRPPQAGEIMKMPGPGITGYPVTRFLQKDLFHSIIY
YRHSGSEVFDDSFEVVLSDFHDPPNLSEPQVIVIQIQPVPDQPPQEAPGVTRHLVVNETD
VTYLTKQQLHFVDLESPDSELTYTVTTPPFYSTTYGGSDAGRLFLVDSIPKFNKDPNAPM
LRLFTQNAVNYMKVAYMPPILDIGPYPQHIQFVLSVTNQQGSMTAGICFNITILPVDNLA
PEVHVRQMTVDEGGESWVSEEHMRLTDQDSLEDSLHVKLMTEPQHGSIYLDGTPMSPGQT
FTVRDLKNLKVRYRHDSSETEHDDIKFIATDGINIADFVLHVKVTLVNDEVPALVPGLKT
ILACAEGQEVVISVEYICATDPDSDDSTLMYLIARQPYHGVVQRNGIVVDRFIQADITAG
LISYRHTGQEIGLQPRHDVVTFVISDGESGLLPSCCSDKATLFSAQTPGVQNSLPVYDLN
ITVYPVNNQPPSIAVGEVFKVDEGGSASITVTHLRVEDQDSAPEDLKLILVAPPQFGYIE
NVLPSPGFEKSNMGISIACFTYRDVLNGHINYVQSRHQRMEPTTDQLMLHVSDGKQQSSS
VPFYIIISPTNDEIPDFLARNITVREGDMKELDPSIISAVDLDVPRDRLMFSIVQQPQHG
SIMSVPHGNDVTHYKRGSEIPVEHFTMDDLRSGMTLMYMHDDSESEQDGFIVQLSDGKHQ
LQKHVQVKVLPVNDEEPQIIRNTGIEIEAGESRLISSAVLSAHDKDTSSSNIIYVFESIP
SHGVIQMKVGTDWVSVSAGMNCSQQVLDMNLLRYLHTSHPGAPAADFFVFHLLDGKNRSP
AQHFHITVKELEKGDIALFLKPVRSSRGERVVLTTDVLLAVDGADKPEELLYIVTVPPAH
GHVEYIKHTGVQIQSFSQLDVAANLVCYVHDNRATSPKETLQFVVSNGISTRNGTLEILV
ELTDEVLPTLVHNTGLRVPQGSTITLTPDALFLSDPDSPHTALSYKVVHLPQYGQLLLKG
QPLVAGSSFTQQNIQDLAVAYKHSGGASQIDRFRFTASDSTERGFLLDRKVQTEPVFFTL
QIEALDSSAPQIAVLETLWKVELLKDGRYGIFISSRELKAQDTNSADGDLIYHILRSPYF
GYLENYTNGEFVRHRFSQRDLNRRNILYIINSALDALTDSLEFAVSDALGNTGPSHKLEF
SWASVELTRTEYLICESQGSVSLTIQRKGNVQDSSYVTVQVKEITASAGHDFIPASSLIQ
FDPGTVSRVWKVEIVQDRLEEADEKFEVTLVSPVGAVLKDKSKATIFIKDTNGQCRENRI
KAGTSIQGQEVQPGPYPQHGSIQVETLPFSQGYIRGDGDIIVEAPSTTKKRLRVIGNGKV
VQPSETIHHGSDVIYRYHGIVSMAVEEDKADSRTDRKAQVQVTSWGQQRSPAVRTKLQQT
ASHANSRLSQPFVTQPSSKPCTPELTGFLHYNDSLGQLFRCNGDSWRPWTPTNETVKAQK
CPRGWTYHNNYCYILSTERKATWSAAVRACRESFNGNLVSVLSKGDMDWLWDFSERKPFW
IGLNDRESKGRWEWVGGEPVTYTNWRQSPPKNRKKGTRKCVLVWRKTKWQIRDCKKGKGH
RYVCYVKM
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaatagacaggacatatttgcctttcctcttgatgggacttctccaccagatt
cagggctctctggtaaaaaccaatcttggtgttaaggtgaagagggggcagtcagtcttt
ctgcaggagggggacttgcagtttcatatacccagagacaaggatgcctgcaagctggaa
gttgtgctgaatgagcccattacacagcgggtcggcacattgtccccacaggtttttgac
tgtcactttttggctgatgaagtgaaatacactcataatggatgtccgattttaaaagag
gatactgttaaacttcgtctgtacagatttacagagacagagacctacagtgagctgttc
tctctcagtgttgaaatcatggagcctgactgtaatgtgattaggttcggatcgcagaat
ctcgaggtgccagagttttatggcctttccaatatcctggatggcaatgttgtgtctttc
cactatgaacatcgacataatattgagtgcacagttcgggtgtcaactttggagacacat
ctacctgttcacggtcaactagtcactggggaaccagagaaaccagagggaccgagaggg
gatgaaccagatagctttgttcctcttcgaagacagctggataataaagctcgagctcat
tgtaaaagcgatgactgtctaaagggtcttaaactgctgaagatcaccaaagtaccatgc
aatgatttcctcatgatgggcatccgctaccaacacattgaccctccatctccagacata
gattacatcgccattagactggacctcacagacactcgtagcaggagcataattcagtcg
gagcaggcctggatcccggtaaccattaaaggtgctatgcccaatcagccgcccaaacct
gctttcatgtccatgttcatcttagaggtggaccagttcatcctgactcctctttccacg
gcaactctggatgcggaggatgaagagacgcccaaacagaggctggtgtttaacatcact
aacccccctaatgagggtttcattactcatctgtctgatcacaccaaacctatctcctcc
ttcacctggatggatctcaacgacatgctgatcagctaccagcctccaaactccagtcac
acacagcgtaggaactatgaggtggagtttgaggtgcatgatttctactttgagaaaagc
cagcctgtgatggtacatgtgtcaatcaggacagctgataccaatgcaccaagagtatca
tggaacatgggcctcagtctgttggaaggtcagtctcgtccaatcacatgggatcagttg
cagattgttgacaatgacaacctgaaggctgtgaagatcatcactgtggatggcctgcag
catggcagactaactgttagaggtggaaaaggtttcatgttcaccgtgaacgatattaag
gatggtgcggtacactaccatcatgatgacagtgacactactaaagattatatagttttc
cggattactgatggcttacatcaaactagacacaagtttcccatcaacgtcctgcccaaa
gatgacagtccacccttcctcattaccaatatggtgctggagctgtctgaaggtcagact
ggtcttttgagaggatccattttgcaagcttgtgatatggactccagtgatgactacatc
atgttcaacatcaccagacctcctcaggcaggggaaatcatgaagatgcctggtcctggg
ataacaggataccctgttacccgttttcttcagaaggacctctttcattccatcatctac
tatcggcactcaggcagtgaggtgtttgatgactcttttgaggtggtgctctctgatttt
catgaccctcctaatctttcagagcctcaggtcattgtgattcaaatccagccagtacct
gatcagcctccacaagaggcaccaggtgtgaccaggcacttggttgtcaatgagacagat
gtcacctacttgaccaagcaacagctgcactttgttgacttggagtcaccagatagtgag
ctcacttacaccgtcaccaccccacctttctacagcaccacctatggagggtctgatgca
ggaaggttgtttctggttgatagcatcccaaaatttaacaaggacccaaacgccccaatg
ctgagacttttcactcagaatgcagtcaactacatgaaagttgcttacatgccccccatc
ctggacattggaccctacccccagcacatccagtttgtcctgtcagtgaccaaccagcaa
ggcagcatgaccgctggaatctgcttcaacataacgattctgccagtggataacctggca
ccagaggtacatgtgaggcagatgacggtggatgaggggggagagagctgggtgagtgaa
gaacacatgcgtctaactgaccaggactcgctcgaggactctctgcatgtgaagctgatg
acggaacctcagcatggcagtatttacctggacggcacacccatgagtccaggccagact
tttacagtcagggatctgaaaaacctaaaagttagatatcgccacgacagttctgagaca
gaacatgatgatattaaattcattgccacagatgggattaatattgctgactttgtacta
catgtcaaggtgacgctagtcaacgatgaggtgccagcgctagtgccaggtttgaaaacc
attttagcctgtgcagagggacaggaagtggtcatctccgtggagtacatctgtgccaca
gatcctgacagtgatgatagcacattgatgtatctgatcgcccgacaaccatatcatggg
gtggttcaaagaaatggcatcgtggtggaccgcttcattcaagcagatataactgctggc
ttaatttcctatagacacacaggacaagagattgggctacaaccacgtcatgacgttgtc
acgtttgtgatctctgatggagaatcagggctacttccttcctgttgcagtgacaaagcc
acattattcagtgcacaaacacctggagtacagaactccctgcctgtctatgaccttaat
atcaccgtttatcctgtgaacaaccaaccaccatctattgctgttggagaagtgtttaag
gtggatgagggagggtcagcctccatcacagtgacccatctgagagttgaagaccaagac
tctgctccagaggatcttaagctcatcctggttgctcctccacagttcggctacatagag
aacgtcctgcccagtccaggatttgaaaagagcaacatgggaatcagtattgcctgtttc
acctacagggatgtgttgaatggacacattaactatgtccagtctagacaccagaggatg
gagccgaccactgaccagctcatgctgcatgtgtccgacgggaaacagcagtcctcttca
gtaccgttctacatcatcatcagtccgaccaatgatgagattccagacttcctggccaga
aacatcacggttcgagagggagacatgaaagagttggacccgtctataatcagtgcggtg
gatcttgatgttcccagagaccgtttaatgttcagcatagtccagcagcctcagcacggc
tccatcatgagtgtcccacacggcaatgatgtgacacattacaagcgtggatctgagatc
cctgtggagcacttcaccatggatgacctcaggagcggcatgactctgatgtacatgcac
gacgactctgagagtgagcaggatggatttattgttcagctctctgatggtaaacaccag
ctccagaaacatgtgcaggtcaaagtactgcctgtcaatgatgaggagccacaaattata
cggaacactggcattgagatcgaggctggggagtccagactgatctccagtgctgtgctt
agtgctcacgacaaagatacttcttcttctaacatcatctatgtgtttgagagcatacca
agtcatggtgtcattcaaatgaaggttggcacagactgggtgtccgtatctgcaggaatg
aactgctctcagcaagttttggatatgaacctgttacgttaccttcacaccagtcatcct
ggagcacccgctgctgatttctttgtcttccatctgttggatggcaagaaccgctctcct
gctcagcacttccacattacagtcaaagaactagagaaaggagacatagcattgttcctg
aagcctgtgaggtctagtcgtggggagcgtgtggttctcaccacagacgtcttgctggca
gtagacggcgctgacaagccggaggagctgctctacattgtcactgtacctccagcacac
ggacatgtggagtacatcaaacacactggcgtgcaaattcagtcgtttagtcagctggac
gtagcagcaaacctggtttgttatgtacatgacaacagagccacttcacctaaagagacc
ctgcagtttgtggtcagcaatggcatatcaactcgcaacgggacgctggagatcttagtg
gaattgaccgatgaggttctgcccacactagtgcataacactggtctacgggttccccag
gggtccaccataactttgacacctgatgccttattcctgtctgaccctgacagcccacac
actgccttgagctacaaggtggtccaccttccccagtatggccagttgctcttgaaagga
cagccactggttgctggtagcagttttacccagcagaatattcaggatctggctgttgca
tacaaacactctggaggagcttctcagatcgatcgcttcagattcacagcctccgacagc
acagaaagaggcttcctgctggacaggaaagtgcaaactgagccggtcttcttcactctg
caaattgaagctctcgacagctctgctccacagatagcagtgctagaaaccctgtggaaa
gtggagctcctcaaagatggtcgttatgggatctttatttcctccagagagcttaaggct
caggatactaactctgcagatggtgacctgatctatcacatcctcagatcgccttacttt
ggatacctggaaaattatactaatggtgagtttgttaggcatcgtttctctcagagggat
ctgaacagaaggaatattctctacatcataaactctgctctggacgctttaactgacagc
ctggagtttgctgtttctgatgcactgggcaacactggaccctctcacaaattggagttc
agctgggccagtgtagagctgaccaggactgagtatttaatatgtgagagtcaggggtca
gtctcactcaccatccagaggaaggggaatgtgcaggactcatcttatgtgactgtacag
gtgaaagaaataacagcatctgctggacatgattttataccggcttcatctttgattcag
tttgacccagggacggtcagtcgagtatggaaagtggagattgttcaggatcgtttggag
gaagcagatgagaaatttgaggttaccttggtatctccggtgggtgcagtgctgaaagac
aaatcaaaagccaccatcttcataaaggacacaaatggacagtgcagagagaaccggatc
aaagcaggcactagcattcaaggccaagaggttcagccagggccgtaccctcaacacggc
tccatccaggtggaaacattacctttctctcaaggctatatcagaggtgatggagatata
atagttgaagctccctccactacaaagaaaagactcagagtcattgggaatgggaaagtg
gttcagccttcagaaaccattcatcatggatctgacgtcatttacagatatcatggtatc
gtatcgatggcagtggaggaggacaaagctgactcaaggactgacagaaaggcacaggtg
caggtaaccagctgggggcagcaacgctctcctgcagtcaggacaaaactacagcaaact
gcctcacatgcaaacagcagactttcgcagccttttgtgactcagccttcctctaaaccc
tgtactccagagctcactggctttctccattacaacgacagcttaggtcagctgtttcgc
tgtaatggtgactcctggaggccctggacacctactaatgagactgtgaaagcacagaaa
tgtcctcgaggatggacgtaccacaacaactactgttacatactgagcacagagcgcaaa
gccacgtggagcgctgcggtgcgggcctgcagagaaagcttcaatggaaacctggtcagc
gttttgtcaaaaggagacatggactggctgtgggacttcagcgaaagaaaacccttttgg
attggtctgaatgatcgtgaaagtaaaggccgctgggagtgggtgggcggagagcccgtc
acttacaccaactggaggcaaagccctccaaaaaacaggaagaagggaacaaggaagtgt
gtcctggtctggaggaagacgaaatggcagatacgagactgtaagaaaggaaagggacac
cgctatgtgtgttatgttaaaatgtga
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