Megalobrama amblycephala (Wuchang bream): 125265777
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Entry
125265777 CDS
T08212
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125265777 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125265777 (usp47)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125265777 (usp47)
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125265777 (usp47)
Ubiquitin system [BR:
mamb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125265777 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
125265777
NCBI-ProteinID:
XP_048042176
LinkDB
All DBs
Position
LG3:58272831..58319773
Genome browser
AA seq
1372 aa
AA seq
DB search
MEMVPSEEKQLVPKEGIFWSCRQSIFEEMQKRFSQIESAAEEPRVLCIVQDTTNAKTISE
RLTINLPASTTVNKFYEDVAHKAGYVNGTFCLAWANAGDMAPLDQASEMSLVLSGFEAGK
KNFLQLTDKDGEQPQIASDESGTADSSGLDDSSQDRFIGPLPRDGTVGCSSDYSSPSYSY
SSILNKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEDSEEDPVTSIPYQL
QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQVFGSVEEALQAFIQPETL
DGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELD
MSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLDNTSSAERVL
KPKSSLTFELFSVMVHSGSAAGGHYYACIKSFSDSQWYSFNDQHVSKITQDDIRKTYGGS
SGSRGYYSSAFASSTNAYMLMYRLKDPSRNSKFLEVEDFPEHIKRLVQREKESEEQEKRQ
REIERNTCKIKLFCMHPVKLMMMENKLEVHKDKTLREATEMAYKLMDLEGVVPLDCCRLV
KYDEFHEYLERSYEGEEDMPMGLLLGGVKSSYMFDLLLEIRRPDQAFQPYKPGEVMVKVH
VVDLKSESIAAPVSVRAYLNQTITEFKQLIAQATGLCAETMRVVLERCYNDLRLLYVPNK
TLKAEGFFRSNKVFVESSDSTDHQVAFTDSVLWKLLDRHGNTIRLFVSLPEQSPGSLASR
TICPKASADSEDSFDGAKGSRKSVEAILEESTEKLKNLSLQQQQQQTSSTSDSQKSSEHS
DFEHIESPAQEPDTASQPSQTENCTRVASDTENQFPSEERSDSDVNNDRSTSSVDSDILS
SSHSSDTLCNADSGPLPLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDENG
KSKAEAQYLYFKAEPYSQEDGSGEGQKCLLVHVDKRITLAAFKQNLEPFVGVPSTQFKVF
RVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNDPEPCKFLLD
TVFAKGMTVRQSKEELLPQLKDQCKLDLSIDRFRLRKKTWKNPGTVFLDYHVYEEDINIS
SNWEVFLEVLEEPERMKSMSQLAVLTRRWCPAQMKLEAFREVVLESSSVEELKEKLSEMS
GIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDSTEE
LMELSEEERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPTKDPGQD
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagaaaagcagcttgtgcccaaagagggtattttttggagt
tgcaggcagagtatttttgaggagatgcagaagaggttctcacagattgaaagtgcagcg
gaggagccgagagtgctgtgtatagtgcaggacaccaccaatgccaagaccatcagtgag
aggctgacaatcaacctgcccgcctccaccaccgtcaacaaattctacgaggatgtggct
cacaaggctggatatgtgaacggcactttctgcctggcgtgggccaacgctggcgacatg
gctcctctggaccaggccagtgagatgtccctggtgttgtccggttttgaggcggggaag
aagaatttcttgcagcttacagacaaggacggggagcagcctcagatcgcttcagatgaa
tctggcacagcggacagcagtggtcttgatgacagctctcaggatcgcttcattggaccc
ttaccgcgggacggtactgtaggctgcagcagtgactacagcagccccagttactcgtac
tcctccatactcaacaaatcagagacaggttatgttggtttggtcaaccaagcaatgacc
tgttacctgaacagcctcttgcagaccctgttcatgacccctgagttcaggaatgcactc
tacaattgggagtttgaggattctgaggaggatccggtcaccagtatcccataccagctc
cagaggctgtttgttctcctgcagacaagtaagaagcgtgccatcgagaccacagacgtg
acccgcagctttggctgggacagcagtgaggcctggcagcagcatgacgtccaggagctt
tgcagagtcatgtttgatgcactagagcagaagtggaaacagaccgagcaggctgacctg
atcaaccagctttaccagggcaaactgaaggactatgtgcgctgtttggagtgtggctat
gagagctggaggattgacacgtacttggacatccctctggtcatcaggcccttcggggct
agccaggtttttggcagcgtggaagaagccctgcaggccttcatccagcctgagactctc
gacgggcccaaccagtacttctgtgagcgctgcaaaaaaaaatgtgacgcccgcaagggc
ctgagattcctccatttcccatacctgctgactctgcagctgaaacgctttgactttgat
tacaccactatgcaccgcattaaactcaatgaccgcatgaccttccccgaggagctggac
atgagccctttcatcgacgtcgaggatgagaaatcacctcagacagagagctgcactgac
agtggggcggagaatgaaggaagctgccacagtgaccagatgagcaatgatttctccacg
gatgacgcagtggacgagggcatctgtctggataacaccagcagcgcagagcgggtgctc
aaaccaaagagctctttgacctttgaactcttctcggtcatggtgcattctgggagtgct
gcaggcgggcactattatgcctgcatcaagtccttcagtgacagccagtggtacagcttc
aatgaccagcacgtcagtaagatcacgcaggatgacattcggaagacatatggcggatcc
tcagggagcagaggctattactccagtgcctttgccagctctacaaatgcatacatgctc
atgtacagactaaaagacccctccagaaattcaaaattcctggaagtggaagacttccca
gagcacataaagagactggtgcaacgagagaaagagtctgaggagcaggagaagaggcaa
agagagatcgagcgcaacacatgcaagatcaagctattctgcatgcatccagtgaagctg
atgatgatggagaataagctggaggttcacaaggacaaaactctcagagaagcaacagaa
atggcttataagctgatggatctcgagggagtggtgccactggactgctgtcgattggtc
aaatacgatgagtttcatgaatacctggaacgttcgtatgaaggcgaggaagacatgccc
atgggtttgctgctcggcggggtcaaatcttcatacatgtttgacctgctcctggagatc
cgcagacctgaccaagccttccagccctacaaacctggagaggtgatggtgaaggtccat
gtggtggatctgaagagcgagtcaattgctgctccagtcagtgtcagggcatatctcaac
cagaccatcacagagtttaagcaactcattgcacaggccacgggactttgtgcggagacg
atgcgtgtcgtcttagagcgctgctataatgaccttcggcttctttacgtgcccaacaag
actctgaaagcagagggtttcttcaggagtaacaaggttttcgtggagagctcagactcg
acagatcatcaggtggcgttcactgactctgttttgtggaagctcttggatcgccacggg
aacacaatcagactgtttgtctccctgcccgagcaatcgccaggctctttggccagtaga
actatttgccccaaagccagcgctgactctgaggactcttttgatggggcgaagggcagc
aggaagtcagtggaagccattcttgaagagagcacagagaagttgaagaacctttcttta
cagcagcagcagcagcaaacctccagcaccagtgacagtcagaagagctccgaacacagc
gacttcgagcatatcgagtcaccagcacaggagccggacaccgcctcacagccttcacag
acggagaactgcacacgggtcgcctccgacacggagaaccagttcccctctgaggagcgc
tcggactcggacgtcaataacgaccgcagcaccagctcggtggacagtgacatcctgagc
tccagccacagcagcgacacgctgtgtaacgcagacagcggcccgctgccactggctaac
ggcctcgactcgcacagcatcaccagcagccggcgctccaaagcacacgaggggaagaag
gagacgtgggacacggcggaagaagactcgggcacggacagcgagtacgacgagaacggc
aagagtaaagctgaagcccagtacttgtacttcaaagcagagccatactctcaggaggat
ggatccggagaaggacagaaatgtttacttgtccatgttgacaagaggatcacactggct
gcattcaaacagaatctagagccgtttgttggcgttccctccactcagtttaaggtcttc
cgtgtttatgccaacaaccaggagtttgagagcgtgcggctcaatgagacgctctcctct
ttttctgatgacaacaagatcacgattcgattgggacgtgcactgaagaaaggagaatac
agggtgaaggtctaccagctgctagttaatgacccagagccctgcaagttccttttggat
actgtgttcgctaagggtatgactgttcggcagtctaaggaggagttgcttcctcaactc
aaagaccagtgcaaactggacctcagtatagacaggtttagactcaggaagaagacctgg
aagaacccaggcacagtgtttctggattatcacgtctatgaggaggacatcaacatctcc
agtaactgggaggtgttcctggaagtccttgaagaacccgagcggatgaagtccatgtct
cagttagcggttctgacccgtcgctggtgcccagcccagatgaagcttgaggcctttcgg
gaggtggtgctggagagcagcagcgtagaggagctcaaggagaagctcagtgaaatgagt
ggaattcctttagaaaacttggagtttgccaagggacgaggaacttttccttgtgacatt
tcagtgctggagatccatcaggatttagattggaatcctaaagtctccactctcaatgtc
tggccactctacatctgtgatgatggcgctgtgatcttctaccgggacagcaccgaggag
ctgatggagctgtccgaagaggagcgcaatgaactgatgaagaaagagagcagccgcctg
ctgaagacaggccaccgggtcagctactccccccgcaaagagaaggccctcaaaatctat
ttggacggagggcccaccaaagaccctggacaggactga
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