Megalobrama amblycephala (Wuchang bream): 125267650
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Entry
125267650 CDS
T08212
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125267650 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125267650 (trim32)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125267650 (trim32)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125267650 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
zf-RING_4
Baculo_IE-1
zf-tcix
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
125267650
NCBI-ProteinID:
XP_048045452
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All DBs
Position
LG4:42677384..42682440
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AA seq
659 aa
AA seq
DB search
MATPTSLDPDLVREVLECPICLETYNQDQLRPKLLQCGHSVCRQCLEKLLASTINGVRCP
FCSKVSRMSSISQLADNLTVLKIIDCASSCGSTMGLMCKSCKNRLPRQYCRDCSIVLCDI
CKTEGHQRQGHVVQAIRVAAEQCRKDISGKLSNLREAMGNIQKKKAAIDNVTKSLRLKYK
AVQQEYAKAELRLQEELGRSRRAFATSLAEIEKLNAQILEEQTYLLSIAEVQVVSRCDYL
TMRIKQTDIALLEEGSNNEEEELDLKNNLPIILKLQDPELVKMECATPLNVAQLTTKPCT
VNAEEEDGLDFAAAAPLDIYRDIDMVTAVEEAVCASPGSFKSKSVDGGGPSPGASGGQLC
QFVKKMGCKGNLPGMFNLPVSICVTPQGEVLVADRGNYRIQIFNRKGFQREIRRNPSSID
NFVLSFLGADLPNLIPLSIAITAQGLIGVTDNYDNSVKVYTTDGHCIACHKNQLIKPWGI
AAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFVTCDSSGTVYFTQGLGL
NIENRHNEHHLEGGFSIGSVGMDGQLGKQLSHFFSENEDFRCITGMCVDSNGDLIVTDSG
RKEILQFPKEGGFNVLIQEGLTCPVGVAVTQKGQLLVLDCWDHCVKVYTYLQRRRSSTC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccaacgtccctagacccagatttggtccgggaggtgctggaatgccccatt
tgcctggagacctacaaccaggatcagcttcgacccaagctgctgcagtgtggtcactct
gtgtgtcgccagtgccttgagaaactcctcgccagcacgataaatggcgtgcgctgcccc
ttctgcagcaaggtgtctcgtatgagcagtatttcccagctggctgacaatctcaccgtg
ctgaagatcatcgactgtgcaagttcatgcggctccaccatgggcctcatgtgcaagtct
tgtaaaaaccgcctgcctcgtcagtactgccgtgactgcagcattgtgttgtgtgatatt
tgtaaaaccgaggggcaccagcgtcagggccacgtcgtacaggccattcgcgtagctgcc
gaacagtgccggaaagacatcagcgggaagctttctaacttgcgggaggcaatgggcaac
attcagaagaagaaggcagctatcgacaacgtgacaaaatcactcagactgaagtacaag
gctgtgcagcaggagtatgccaaggctgagttgcggctccaagaggaactgggccgctcc
cgccgtgcctttgccacctccttggctgaaatagagaagctcaatgcccagattctggag
gagcagacgtacctgctcagcatcgctgaagtgcaggtggtgtcaagatgtgactaccta
accatgaggatcaagcaaactgatattgctctactagaagaagggagtaacaatgaagaa
gaggagctggacttaaaaaacaatctgcctatcattctgaaactacaagaccctgaactg
gtcaaaatggagtgcgcaacacccttaaacgtggcgcaactgaccacaaaaccatgcact
gtcaatgccgaagaggaagatggactcgatttcgccgctgccgcccctttggacatttat
cgtgatatcgacatggtgacggcggttgaagaggctgtttgcgcttctcccggtagcttc
aagtccaagtctgtagatggaggaggaccttctccaggggcttctggtgggcagctctgt
cagttcgtgaaaaaaatgggatgcaagggcaatcttccaggcatgttcaacttgccggta
agcatttgtgtcacgcctcagggtgaggttctcgtggccgaccgagggaactaccgcatc
cagatcttcaaccgcaagggcttccaaagggagatacgccgcaacccgagcagcatcgac
aacttcgtcttgagcttcctcggtgccgacctgcccaacctcatccctctctccattgca
atcactgctcagggcctcatcggtgtcactgataactacgacaactccgtgaaggtttac
accaccgatggccactgcatcgcctgccacaagaaccagctcatcaagccgtggggaatc
gcggccatgccttcggggcagtttgtcgtgtccgatgtcgagggggggaagctgtggtgc
ctggctgtggatcgtaacgtaggggtagtgaactataaccgattgtgctcggccgtcagg
cccaaatttgtaacttgcgactcctcaggtacagtctacttcacacagggcttgggtctg
aacatcgagaatagacacaacgagcaccacctcgaaggggggttttccatcggctcggtg
ggaatggatgggcagctgggaaagcaactcagccacttcttctcagagaacgaggacttc
cgttgcatcacaggcatgtgtgtggactctaacggggacttgatagtgacagacagtggc
cgtaaggagatactgcagttccccaaagaaggtggcttcaacgttctcattcaggagggc
cttacgtgccctgtaggagtagctgttacccagaagggacaactgcttgtcttagattgc
tgggaccactgtgtgaaggtttacacatacttgcaaaggagacgttcctctacgtgttaa
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