Megalobrama amblycephala (Wuchang bream): 125269098
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Entry
125269098 CDS
T08212
Symbol
rin3
Name
(RefSeq) ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125269098 (rin3)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125269098 (rin3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RA
SH2
ADDB_N
TUG-UBL1
DDHD
Motif
Other DBs
NCBI-GeneID:
125269098
NCBI-ProteinID:
XP_048047799
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Position
LG5:31353724..31374662
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AA seq
1081 aa
AA seq
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MLSPGPSTAPPSLSKPTSPTISSPIQASFHSQTSPLPPSPPSSSLTSTSAFPLVDITDNP
STDTASLPLPTSPPISCVQPSSPQLSSKPSLPPHKPMSPQALKPPLPAQLPSALPKSFSS
AQPRPPPPPATRPSSPPQPRPPPPVASKPPVPTSPVSKSNKPFPPGISILEKLIKTCPVW
LQLGMKQDRAMHILSKEFPGIFLVRRDANQKTMVLAVRLPDQLGEPHVKELPIKEEKSLL
YLEGSVLVFENIFKLIAFYCVSRDILPFPLKLPQVIQKVEKYEDMEVISSLGSEFWNSAL
NSHEEVENVAGSCGASDGQGKSSSCEIQLSIGSDRLWYVNPIFIEECSNSSSPTSSTPVL
RTQSLNAPIQAPPKYKRPPPLRPRPPSSPECSLNYALAKPSKGEFKSVLSSLPPSGQKGE
GSDSKRVDREQERQGTPAPSTERDKPAVLQPAQSKEGKQLSNTASHRVPPIPIRRRLSEK
QASEEPTQKEVHTSTSIEAKDDFPQVPVASLICLDDSIEERDKPMEPDTQQLQEMPVEES
KVTNGAPMVTREVAPQPKRPNAPVAPPRKKRLSQNLTGQVSQSFGNSLAPIPQEPTSIVP
LNSSSPSPVRHSLCINAAHHKVSDVSLYSPEGGAPPDHDSYSTSSTEEEPDSNMSTGAVM
KRSPTIMLDRAKQRLSMVSMANLSNVLTGFMNADRKLQKRIVELSRDGNTYFGNLVKDYR
TFTLDTMRKHTSSTEMLQEIRQMITQLKSYLIQSAELQNLQEAVAYSEEKLEIIIEAALC
KSVLKPLREAVYNGLKDIHSRAGNLKKLKENQQVVQGTTTTDLGVITSVPENAVMEKIQT
KLSNLHQEYSPQKKIDLLLKTCKMIYESMSVGSPGKVHGADDFLPVLMYVLARCNISALL
LDVEYMMELMDPALQLGEGSYYLTTTYGALEHIKNFDKQAVTRQLSLEIQDSIHRWERRR
TLNKARASRSSVQDFINVSFLEAGSNTKTLGARPNTTAQDLCNQCAEKFEVLDPESYCLS
VLVEGHYKHLSPEEFPLTIKSTLHHSEPRKEYYFVYRHGRWPEPESVDQTPTTPATEESL
I
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgctttctcctgggccttccacagcacctccaagcctctccaaacccacttccccaacc
atatcttcacctattcaggcatctttccattcacaaacctctcctcttcctcctagtcct
ccttcttcttccttgacttctacttcagccttccctttggttgatataactgacaacccg
tccactgacaccgcctcccttccgctccctacttcacccccaatttcatgtgtacaacct
tcctcacctcagcttagctccaaaccatccctacctccccacaaacccatgtctccccag
gccttaaagccacctctcccagcacaacttccctctgctcttcctaagagcttctcgtca
gcccagcctagaccacctccacctcctgccacaaggccctcatctccacctcaacccaga
ccacctccaccagtagcctcaaaacctccagtccccacatctcctgtgagcaagtccaat
aaaccttttcctcctggtatcagcatcctggagaaactgattaagacctgtccagtgtgg
cttcaactgggaatgaagcaggacagagccatgcatatactgagcaaggagtttccaggg
atctttttagtcaggagggatgcaaatcaaaaaacgatggtactggcagtacgtcttcct
gaccagctgggggagccccatgtcaaggaactgcctataaaggaagaaaaatccttgctg
taccttgaagggtctgtgctggtgtttgagaacatttttaaactcatagctttctactgt
gttagccgggacatcctcccttttcctctgaagttacctcaggtaattcaaaaggtagag
aaatatgaggacatggaggtgatctcatctctaggttcagagttctggaactcagctctg
aatagtcatgaggaagtggaaaacgttgctggtagctgtggtgcttcagatggacagggg
aaaagcagttcctgtgaaatccagctttccattggcagtgaccggctttggtatgtcaac
ccaattttcattgaggaatgcagcaacagctcgtcacccacctcctctacgcctgttctg
aggacccagagtctcaacgcaccaatacaggctccgcccaaatacaaaaggccgccaccc
ctacgccctcgtcctcccagttcacctgagtgctctttaaactatgcattggccaagcct
tcaaaaggggagtttaagtctgttctcagttctcttcccccttcaggccagaaaggggaa
ggaagtgactcgaagcgtgtagacagagaacaagagagacagggaactcctgccccaagc
actgagcgtgacaagccagctgtcttacaaccagctcagagcaaagaaggaaagcagctt
tctaatacagcttcacatcgagttcctccaattccaatccgacggaggttatctgaaaag
caagcttcagaggaaccaacacagaaggaagtccacaccagcacctccatagaagcaaag
gacgattttccacaagtccctgtagcatcactcatttgcctagatgacagtatagaagaa
agggacaagcctatggagccagatactcagcaacttcaagagatgccagtggaagagtct
aaggtaactaatggagctccaatggtgactcgagaggtagcacctcaaccaaaacggccc
aatgctccagtggcacctcccaggaagaaaagactgtctcagaatctgacgggacaagtc
tcccaaagctttggaaactcacttgcgccaattccccaagagcccacttccattgttcct
ttaaactccagcagccccagtcctgtccgccactcgctctgcatcaacgctgctcatcac
aaagtctcagatgtttctttatactcacccgagggtggagctccaccagaccacgactcc
tactcaaccagtagcacggaagaggagccggattccaatatgtcaacaggtgctgtgatg
aagaggtccccaacaattatgctagaccgcgccaagcagcgactctcaatggtgtccatg
gcgaacctctccaatgtcctcacaggcttcatgaatgcggaccgcaagttgcagaaacgc
atcgtcgagctgtctcgggatggtaacacgtactttgggaaccttgttaaggattatcga
actttcactttggacactatgcggaaacacacctccagcacagagatgctccaagagatc
aggcagatgataacccaactgaaaagctacttgatccagagtgcagagttgcaaaatcta
caggaagcagttgcgtactctgaggagaaactggagatcattattgaagcagcactatgc
aaaagtgtcctgaaacccttgcgggaggctgtgtataatggactgaaggatatccactcc
cgtgcaggaaatctgaagaaattaaaagagaaccagcaagtggttcaggggaccaccacc
acagacctgggggtcattacaagtgttcctgaaaacgccgtcatggagaaaattcaaaca
aagctcagtaacctacaccaagaatattcacctcagaagaagatcgacctcctcctcaag
acctgcaaaatgatctatgaatcgatgtctgtgggcagtccaggaaaggttcacggggct
gatgacttcctgcctgtgctgatgtacgtcttggctcgctgtaacatcagcgctctgctg
ctggatgtagagtatatgatggagctaatggatccggcattgcagctcggagagggttca
tattatctcaccaccacttatggagctctggagcacatcaaaaattttgataaacaagct
gtgaccagacagctaagtttggagattcaggactccatccatcgttgggagcgtcgccgc
accctaaacaaagccagagcgtcacgctcctctgtacaggacttcattaacgtgtccttt
ctggaggccggctccaacaccaagaccctgggagcgcgtcccaacactaccgctcaggac
ttgtgcaatcagtgtgcagagaagtttgaggtattggatcctgaatcctattgcctaagt
gtgctggtggaaggccattacaagcatttatctcctgaagaatttcctctcacaatcaaa
tccaccttgcatcacagtgagccacgcaaggagtattatttcgtctaccgccacggtcgc
tggccagaaccagagtctgtggaccagacgccaactacaccagcaacagaagagagtttg
atatga
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