Megalobrama amblycephala (Wuchang bream): 125271957
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Entry
125271957 CDS
T08212
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125271957
Membrane trafficking [BR:
mamb04131
]
Protein recycling
Others
Others
125271957
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
125271957
NCBI-ProteinID:
XP_048052306
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Position
LG7:19035672..19266034
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AA seq
1244 aa
AA seq
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MERGIRYCRVNVSAFCTLLLVLFASVPVTKTVITCRSCHLLDKWSGRELLVRMDSGVDSG
KVSGKNGDGSTALFNSAGAETAQPDYGATDNGEHAHSVRKRNTDRLRSEKMPPDDKWKSV
RSNGKVYNLKRAGSHGSSSAPGDPHHRVRRSTKGPGSSPGARSPPAFGNGTARAARRVPR
SELRWNREERRTATSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFN
LGSVTESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLIS
SDEGATYQKYRLNFYILSLLFHPEQEDWILAYGHDQKLYSSVEFGRRWQLVHERVAPNRF
YWSKLGLDKEPGLIHLETSISETQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYV
FVQVSTGGRPIYYVSSRRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNL
YVSEAGGIYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKLNNEVKTYITYNKG
RDWRLLQAPSADLRGNRIHCILPYCSLHLHLHVSANPYTSGNIASRESAPGIIVASGSIG
AELSSSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWLSFDEGR
VWNKYSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIESDY
VPWDLHDQGERCLMGVKRVYRKLKAIARCVMGKTYSVTMLSEPCDCTESDFECDYGFERR
TDGKCTPAFWFPPSSMSRTCTTEHTFLNSTGYRKVVSNNCTGGVMEQYTARRQLCPSQAP
RGLHLVTSEGKLTASLANNVTFLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKH
IYKNVGIYRVSATAENSLGSETVLLFLHITCQLESVHLSAPFVAVKNKEVNLTVVLWPSQ
VGTVTYIWWFGNNSEPVITLEGSVAFTFSREGISIVTVQVSAGNNILQDRKTIAVHEYFR
SHLLAFSSNLDDHNPDVAEWRLDVSRVIKASMVQATGVNPEQLLVTVLPGLPTAAEFFLL
PDKQLTEGKPDKTATHLDQLSELVLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSE
NHSSSAMLMLLSVVVVGLAVFLIYKFKRKIPGLHIYAAMQDEKEQEMIQSPVSPTDSTPS
CSSQRELLTPLEPLDTEPNTQTIECIKPHPRVKFSSDLPTYIDV
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggagagagggatcagatattgccgggttaatgttagtgctttctgcaccctgcttttg
gttttgttcgcttcggttccggtgaccaaaacagtgataacttgcaggtcatgtcacctg
ctggataagtggagcggtcgggaattattggtgaggatggacagtggtgtcgactctggt
aaagttagtggaaaaaatggagacgggtcaacggcgctgtttaattcggctggtgctgaa
actgctcagcccgactacggcgcaaccgacaacggcgaacacgctcactctgtgcgtaaa
cggaatacagacaggcttcgctcagagaaaatgccacccgatgataaatggaagtcggtg
cgcagtaatggcaaagtttataatctaaaacgggcaggttcacatggttcaagttcagcc
cctggagatccccatcaccgagtgcgtagaagcaccaagggacccggctcgtccccaggt
gcgcgctcgccgccggcttttggcaacggcaccgcgcgggctgcgcgcagagtcccccgc
tctgagctgaggtggaacagggaagagaggagaacggccacatcacgacaggaggagctg
aaacttaccagctctacctttgcactgacaggagattccgctcacaaccaagctatggtg
cactggtccggccaaaacagcagcgtcatcctcatgctgaccaaactgtacgacttcaat
ctgggcagtgtcacagaaagctctttatggaggtcaacagattatggaaccacttatgag
aaactcaatgaaaaggtgggagtgaagaccatcctcagctatctgtacgtcagccccaac
aacaagcgcaagatcatgttgctgacagatccagaggtggagagcagtttgctcatcagc
tcagatgaaggcgccacctatcaaaaataccgtctcaacttctacatcctcagcctgttg
tttcatcctgagcaggaggactggatccttgcttatggccacgaccagaagctctacagc
tctgttgagtttggccgtcgatggcagctcgttcacgagcgggtggcgcccaatcgattc
tactggtctaaactgggccttgataaagagccgggcctgattcaccttgagaccagcatc
tcagaaacccaggctttgtatgtcacatgtaaacttcagaactgcacagatgccaacaag
ggcaaaccttttcctggatacattgaccccaactccctggtggtccaagatgagtatgtg
tttgtccaggtgtcaaccggtggtcggccaatctactatgtgtcatccaggcgagatgtg
tttacacccatgaagcttcccaaatacacccttccaaaggatctgcatgtgatcagtaca
gatgagaaccgggtcgtggcagcggttcaagagtggaaccagaatgacacttacaacctg
tatgtgtcagaggctggaggcatttactacacactggctttggagaacgtcatgagcagt
atgggtccagagggaaatgtcatgatagatttatatgaggtggcagggataaaaggcatg
tttctggccaataagaagctaaataatgaggtgaagacatatataacctataacaaaggc
cgagactggaggctcctgcaggctccctcagctgatctcagagggaaccgaatccattgc
atactgccgtactgttcgcttcatcttcacctgcacgtgtcagcaaacccgtacacatct
ggaaatatagccagcagagagtcggctcctggaatcatagtggcgtcaggttcaattggc
gcagagttatcaagcagcaatgttagcatgttcatcacatccgacgctggaaacacgtgg
cggcagatatttgatgaagagtacagtgttctgtatctggaccaaggcggagctttagta
gctattagacatacccctcttcccatcaggcacctctggttgagctttgatgaggggaga
gtgtggaacaaatacagtttcacttcatcacccctgttcgtggacggggtcttgggcgaa
ccaggcgaggagacgctcattatgacgatctttggtcatgtcagtcaccgctcagaatgg
cagctggtaaagatagacttcaggtctatctttaacagaagatgcatagagtctgactat
gtgccgtgggacttacatgaccagggtgaacgctgcctcatgggagtcaaaagagtatat
cgaaagctaaaggccatagcaagatgtgttatgggtaaaacctactctgtcacgatgctt
tccgagccgtgtgactgcaccgagtcggactttgaatgtgattatggtttcgagagaagg
actgatgggaaatgtactccagcattctggttccccccctcctccatgtcccggacctgt
acaacagaacacacattcctcaacagcactgggtacagaaaggtggtgtctaacaactgc
accggtggggtgatggagcagtacacggctcgtaggcagctgtgccctagccaggcccct
cgcggcctccacttagtgaccagcgaagggaagctaacggcatctctggccaacaacgtc
acctttctcgtgttccttgaggagggtgatggatcgaaaaccagcatcacagtggatttc
ggcgacggaaacgccttcacctactccaacgtgagctctatcgaagatggcattaaacac
atctacaagaacgtgggaatctaccgagtgtcagccacggcggagaacagtctgggctct
gaaactgtgctcctcttcctacacattacatgtcagctggagtctgttcatctctccgcc
ccttttgtcgctgtgaaaaacaaagaagtcaatctcacagtggttctctggccaagccaa
gtgggaacagtcacctatatctggtggtttgggaacaattcagagcccgtgatcacgctg
gaggggagtgtggcgttcacgttctctcgagagggaatcagcattgtcactgtacaggtg
tccgctgggaataacatcctgcaagacaggaaaaccatcgctgttcatgaatacttcaga
tctcatcttcttgcattttcatcaaatctggatgatcacaaccctgatgtggccgaatgg
agacttgatgtgagtcgagtcattaaagcctctatggtgcaggcgacgggagtgaatcct
gaacagctgttggtcactgtgttgcctggactgccaacagcagcagagttcttcctgtta
ccagacaaacagctaacagaggggaagccagacaaaacagctactcatttagaccagctc
tcagaactggtgctcagtgctctgaatcagaatctcgttcagttcacactcagaccagga
gtccaggtcacagtatacgctgcccatttatcagcagcgcctctagtggacacaagtgag
aatcacagcagctcagctatgcttatgctcctctctgtggtggtggttggtttagcagtg
ttcctcatctataaattcaaaaggaagatcccaggcctccacatctatgcagcgatgcag
gacgaaaaagagcaagaaatgatccagagtccagtttcacccactgacagcacacccagc
tgcagctctcagagagagctgctcacaccactggaacctctggacacagagcccaacacc
cagaccatcgaatgcatcaaacctcatccacgtgtcaaattctcatcagatcttcctaca
tacatcgacgtttga
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