Megalobrama amblycephala (Wuchang bream): 125273939
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Entry
125273939 CDS
T08212
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125273939 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125273939 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mamb04147
]
125273939 (usp13)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125273939 (usp13)
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125273939 (usp13)
Ubiquitin system [BR:
mamb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125273939 (usp13)
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125273939 (usp13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
125273939
NCBI-ProteinID:
XP_048055731
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Position
LG8:17939844..17973605
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AA seq
859 aa
AA seq
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MATDLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCLNSFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGDDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAILNAPSPYKKQELDSWEEEIQVSKHARSLRQQE
NGVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRETNFPLAVK
LNTITPDGADVYSFDEEEAVLDPHISEHLLHFGIDMLQMQRTENGHHTDNHVQLRVSDWE
VIQEAGLKLKPVYGPGYTGIKNLGNSCYLSTTMQVLFSIPEFQRAYVGNLQRIYDYSPLD
PTQDFNTQMAKLGHGLLSGQYAKPPMKSELIEQVMKEEYKQQQRGISPKMFKSLVSKGHP
EFSSNRQQDAHEFFLHLINLVERNNSGSENPSDVFRFIVEERVQCCQTQKVRYTQRVDYL
MQLPTPLEAASNREELIAFESKRKEAEENMRPPPEPVRARIPFTACLQAFTEPENVPDFW
SSALQAKSAGVKTSRFASFPEYMVVQIKKFTFGVDWVPKKLDISVDVPDFLDLNRLRATG
LQAGEEELPDLTPPIVIPEDTRDSSTNNSLESPEIDESSVMQLAEMGFPLEACRKAVYYT
GNMGAEMAFNWIIAHMEEPDFAEPLAIPSYMEPDLLSPSLPTTSALDNQPPEESISILTS
MGFPRHHTIKALKATNNNLERALDWIFTHPDCEEETEAMSDTADTEPNDNSFSNANAHSD
SSLSPDQDLSSPRVRDGPGRYELFAFISHMGTSTMSGHYVCHIKKEGRWLIYNDHKVCLS
ERPPKDLGYMYFYRRLSSC
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggctacagatctgggagagctactggtcccgtacatgcccaccattagagtaccgagg
acaggagacagggttttcaagagcgaatgcgctttttcctacgactctcctgaatcggaa
ggaggtctatatgtgtgtttgaactcattcctgggttttggaagagaacacgtggagaga
cattaccgcaagactggacagagtgtgtacatgcacttaaagcggcatgtgaaagagaaa
gccacaggtgctgcagggggtgccataccaagaagaaggaatggaaaagtatttttagat
ttagagcttaaccgtgattttaatggagatgattatgagtatgaagatgaagccaagctt
gtcatatttccagaccactttgagatccctttaccaaatattgaggagttgcccgcactg
gtgacaatagcctgtgatgccatcctcaatgcgccatctccatacaaaaagcaggagttg
gattcatgggaagaggagatccaagtatctaaacatgccagaagcctcagacagcaggag
aatggggttcgaattcctcccagcggctggaagtgcgccaagtgtgaaatgagagaaaac
ctgtggctaaacctgacggatggctctgtcctctgtgggaaatggttctttgatgggagc
ggagggaacggacatgcccttgagcactacagagaaaccaacttccccctggcagttaaa
ctcaacacaatcaccccagatggagcagatgtttattccttcgatgaagaagaagcagtg
cttgatcctcacatatcagaacatttgttacacttcggaatagatatgctgcaaatgcaa
aggacagagaatggccatcatacagacaaccacgtgcagctgcgtgtgagtgactgggaa
gtgattcaggaggctggtctaaagctaaagcccgtctatggaccaggatacacgggcatc
aaaaacctgggcaacagctgctacctgagcaccactatgcaagtgcttttcagtattcca
gagttccagagagcgtatgttgggaacctacagagaatatatgactactcgcctcttgat
ccaactcaggatttcaacacacagatggcaaaacttggtcatggacttctctcaggccag
tatgcaaaaccgccaatgaaatcagaactaattgaacaggtgatgaaagaagaatacaag
cagcagcaaagagggatttcacctaagatgttcaaatcgctggtcagtaaaggacatccc
gagttttcctcaaaccgacaacaagatgctcacgaattcttcctgcacttaattaacctg
gtggagaggaacaattcaggctcagagaaccccagcgatgtgtttcgcttcatagttgag
gagcgagtgcagtgctgtcagacacagaaggtgcggtacacacagcgagtggactacctt
atgcagcttcctacacccctggaggcagccagcaacagagaggagctaatagcatttgag
agtaagcggaaggaagctgaggagaacatgcggccccctccagagccggtgagagcccga
atccccttcactgcctgtctgcaagccttcactgagcccgagaatgttccagacttctgg
agctctgcgctgcaagccaagtcagctggagtgaagacttctcgtttcgcatctttcccc
gagtacatggttgtgcagataaagaagttcacatttggtgttgattgggttcccaaaaag
ttagatatatctgtagatgtgcctgatttcctggacttgaatcgcctccgggcaacaggg
ctacaggcaggagaagaggaactgcctgaccttacacctcccattgtcattcctgaagac
accagagacagttcaacaaacaactctttggaatctccagaaatagatgaatcatccgtg
atgcaactggcagagatgggtttccctctggaagcctgtcggaaggcagtgtactacact
gggaatatgggggcagagatggcctttaactggataatagcgcacatggaagagccagat
tttgccgagcctctggcaattccctcttacatggaaccagacctgctcagccccagcctc
cctactaccagtgctctggacaaccagcctccagaagagagcatctccatcctcacctcc
atgggcttccccagacatcacacaatcaaggctctcaaagccacaaacaacaacttggag
cgagctcttgactggatattcacacacccagactgtgaggaagagactgaggctatgtca
gacacagcagacacagagccgaacgataacagcttctcaaacgccaatgcccacagcgac
tcctcgctctctccagatcaggacctgtccagcccccgcgtcagagacggaccagggcgt
tatgaactgtttgccttcatcagtcacatgggaacatccacaatgtctggtcattatgtg
tgtcatatcaaaaaagagggcagatggctgatttacaatgaccacaaagtttgtttgtca
gagagaccccctaaagacttgggctacatgtacttttaccggcgcctgtcaagctgctag
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