Megalobrama amblycephala (Wuchang bream): 125278960
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Entry
125278960 CDS
T08212
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125278960
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125278960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
CCDC92
DUF4201
SPX
Exonuc_VII_L
Fib_alpha
YscO
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
125278960
NCBI-ProteinID:
XP_048064358
LinkDB
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Position
LG11:complement(4257926..4268519)
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AA seq
491 aa
AA seq
DB search
MAEANISVGQDEFMCPVCLDLLKNPVTIPCGHSYCMSCITGCWNQGDQRGVYRCPQCRQT
FTPRPALCKNVVFAEMVEKLKKTKLQAAVPDGSGDVECDVCTGRKHKAVKSCLVCLESYC
QTHFERHEEFRLGNPHKVIDATGRLQQMICPQHGKQLEIYCRTDQCCICYLCTIDEHKNH
DTVTATAERTEKQKHLEQSLTNFQQRIWQREKDIQELRDVLKTHKRSAQKAVEDNERIFT
ELIRSIERSRSEVTQLIRDQEHAAVSRVEELLKQLEQEIEDLRRRNTELEQLSHTDNINF
LQSVESCSVPPKTTVVPRITASSHLLYDDVGKSVLLLKTKIEDFCKEEIKKISDKVTHIE
IISTTEEIIQLPQSCSLVTISGPPPSPYQRLGLPTSPFTITETQPNPLIVPSTQLRPYAM
PVPLPNSYAMPGSRPNPYAMPRSRPNPFAMPGSQLIPESLSDSKRAFNSMISNPYQLGVQ
QYTDIVDNCDI
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccaatatttcagtgggacaggatgagtttatgtgtccagtgtgtctggat
ctactgaagaatccagtaaccattccttgtggacacagttactgtatgagctgtattacc
ggctgctggaatcagggtgatcagaggggagtttacagatgccctcagtgcagacagacc
ttcactccaagacctgccttatgtaagaatgtggtgtttgctgaaatggtggagaaactg
aagaagactaaactccaagctgctgttcctgatggatctggagatgtggagtgtgacgtc
tgcactggaagaaaacacaaagccgtcaagtcctgtctggtgtgtctggaatcttactgt
cagactcattttgaacgtcatgaagaatttcgcttgggaaatccacacaaagtgatcgat
gcaactggacgactgcagcagatgatctgtcctcaacacggtaaacaattggaaatctac
tgccgcactgaccagtgctgtatttgctacttgtgtacaatagatgagcacaaaaaccat
gacactgtaacagctacagcagagaggacagagaaacagaaacatctggaacaatcacta
acaaacttccagcagagaatatggcagagagagaaagatattcaggagctgagagatgtt
ctgaagactcataagcgctctgcacagaaagcagtggaggacaatgagaggatctttact
gaactgatccgttcaattgagagaagccgctctgaggtgacacagctgatcagagatcag
gaacatgctgctgtgagtcgagttgaagaactcttgaaacagctggagcaggagattgaa
gacctgaggagaagaaacactgagctggagcagctttcacacacagacaacattaatttc
ttgcagagtgtcgagtcttgctctgttcctcccaaaaccactgttgtgcccagaatcact
gccagttcgcacctcttatatgatgatgtgggaaaatctgtccttctgctaaaaacgaaa
attgaggatttctgcaaagaagagataaaaaagatatctgataaagtgacacacattgag
atcatttccactactgaggagatcatacaattgccacagtcgtgctccttggtcacgatt
tcagggccaccacccagtccataccaaaggctaggattaccaaccagtcccttcacaata
acagagacacagccgaacccccttatagtgccaagcacacagctgagaccatatgcaatg
ccagtcccactaccgaactcatatgcaatgccagggtcacgaccgaacccatatgcaatg
ccaaggtcacgaccaaacccatttgcaatgccagggtcacagctgataccagaatcatta
tcagattcaaaaagagcttttaactcaatgatatcaaatccgtatcaattaggagtgcag
caatataccgatattgtcgataactgtgatatttaa
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