KEGG   Megalobrama amblycephala (Wuchang bream): 125279736
Entry
125279736         CDS       T08212                                 
Symbol
kdm5bb
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mamb01009]
    125279736 (kdm5bb)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mamb03036]
    125279736 (kdm5bb)
Enzymes [BR:mamb01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     125279736 (kdm5bb)
Protein phosphatases and associated proteins [BR:mamb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125279736 (kdm5bb)
Chromosome and associated proteins [BR:mamb03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125279736 (kdm5bb)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN zf-PHD-like PHD_5
Other DBs
NCBI-GeneID: 125279736
NCBI-ProteinID: XP_048065674
LinkDB
Position
LG12:23008598..23032821
AA seq 1580 aa
MCARVCVDCSCCSSVSRTRGVTDGQTFLRIPGSSVPASLSDSILLRNRTCRMTQRGPAEF
TPPPECPVFEPSWEEFADPFAFINKIRPIAEKTGICKVRPPPDWQPPFACDVDRLHFTPR
IQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLYQLNKLVADEGGFDFV
CRERRWTKIAMTMGFAPGKAVGSHLRAHYERVLYPYNLFQSGTNLLAPEIAAKLSSFRAP
PGLEECLQKASVDDVNDQEKEYKPHDLLQRQNIHVLPSDTSAPARRAKRMKTESGCVKSE
GGEGCENRPNLRRRMGSFVAKPEPEREIPIQVKQEPVEIKELTPEPDKSKSRYKKNTPPL
PLPPPPVSMVDLYVCLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLSDVPKGDWRCPKCL
ARECSKPQEAFGFEQAYRDYSLKSFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVGTI
EEDVTVEYGADIASKEFGSGFPIKGGKFKVAPHDEKYLHSGWNLNNMAMMTPSVLTHVTA
DICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEAVMKKL
APELFESQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQGFNFA
EAVNFCTVDWMPLGRQCVDHYRLLHRYCVFSHDEMVCNMAMKADNLDVVLASAVQKDMQL
MIREERELRDKVRKMGVVQCELFEYDLLADDERQCVKCRTTCYLSALTCPCRPGVQVCLH
HVHDLCSCPVSNYTLNYRYTLDDLYPMMNAVRQRAESYDEWASRVTEVMEAKLDKKRNVT
VFRTLLEESDEKSFPENDLLRQLRLVTQDAEKCSSVAQQLLNGKRQTRYRTGGGKSPNQL
TVEEMRSFVRQLYNLPCSLTQAPLLKELLNNIEDFQQHSEKLLSDEVSADAVSEIESLLE
EGSQFDVFLPELPLLRERLEQARWLAGVQQAEDPVSNPCGFSLDSMRRLIDRGVGLTPHP
STERTMARLQELLTISEELEEKAQALLKARPLESLETLGSMLTQVEGVPAYLPNCLLLQD
TVNRAKEWLQEAEDLQVGGQTPVLGSLSDMVLRAHAIPVRLEPLDQLEVLVSEVQSWKES
AAKTFLVKNSPFTLLEVLCPRWEVGSSLKKKMRKVKGEFVSSGKKKLVKLDSMSDVERAL
SDSKDSASAMFTLAEVRLKELESLCSLRAANESKLLPTADCSALKVCVCQKPAMGAMLQC
ELCRDAFHSVCVRGPSDPLDPEAWLCPLCLRSTKPPLDKILTLLSSLQRIRVRLPEGDAL
RYMVERAVSWQRRAREVIDSYELSLTSQDCRVASPTQRHRTAGHNRKQQCGSPSQSQDWR
VSGQEQTVFYTEQRCIPLQGLSSELEELMVEGLLLQVSLPETQQLYRLLLSGLPTTNMSH
TEHTPYLTQKHSSPQRERDAITSAEKKAKRRMNREDTEIRDRGIKPKSKKQRMGTEKRRE
RKAASVSASDVSQSEDSEEDMTLCPAESCLQPEGEEVYWVQCDCCNRWFHMICVGVSAEL
AAEEDYMCVTCSTTNATRRK
NT seq 4743 nt   +upstreamnt  +downstreamnt
atgtgcgcgcgcgtgtgtgttgattgttcgtgttgttcaagtgttagccggactagggga
gtaacggacggacagacctttttgcggatcccaggaagttctgtccccgcttcgctgagc
gactcgattctgctccggaaccggacctgcaggatgacccagcggggcccggctgagttt
accccaccgcccgagtgcccggtattcgagcccagttgggaggaatttgcagacccgttt
gcgtttatcaataaaatccgacccatcgccgagaaaaccgggatctgcaaggttcgaccg
ccgccggactggcagcctccatttgcatgtgacgttgacagacttcattttactccaaga
atccagagactcaacgagttagaggctcaaaccagagttaaactcaacttcctggaccag
attgctaaattttgggaactacaaggatgcacactcaaaattccacatgtggagcggaag
atcctcgatctgtaccagctgaacaaattggttgcagatgagggcggattcgattttgtt
tgtagagagaggagatggacgaagatcgccatgacaatgggttttgccccaggcaaagct
gtggggtcccacctgagagcccattatgagagggtcctgtatccatacaacctcttccag
tctgggacaaacctgctggctcctgagatcgcagccaaactgtcaagttttagggcacct
cctgggctagaggagtgtctgcagaaggcgtcagtggatgatgtaaatgaccaagagaaa
gagtataaacctcacgacctgctgcagaggcaaaacattcatgtcctgcccagcgacacg
agcgcacctgccagaagagccaagaggatgaaaaccgagtctggctgtgttaagtcagaa
gggggtgagggatgtgagaacaggcccaatctcaggaggaggatgggttccttcgttgcc
aagcctgaaccagagagggagatccctatacaggtgaagcaggaacctgtggagataaaa
gagctgacacctgaaccagataaaagcaaatcacgttacaagaaaaacacccctcctctt
cctcttcctccacctccagtgagcatggtggacctgtatgtgtgtttagtgtgtggaaaa
gggaacgacgaggatcgtttgttactatgtgacggttgtgatgacagctaccacaccttc
tgcttgatcccacccctcagtgatgttcctaaaggtgattggaggtgccctaagtgtctg
gctcgggagtgcagtaaacctcaggaggcgtttggcttcgagcaagcgtacagggactat
tctctgaaatcttttggggaaatggcagactccttcaagtcagactatttcaacatgcct
gttcatatggtacccaccgaattggtagaaaaagagttttggaggttggtcggcaccatt
gaggaggatgtgacagtggaatatggtgctgatatagcctcaaaagagttcggaagcggt
tttccaatcaagggtggaaagtttaaggttgcaccgcatgatgagaaatatcttcacagt
gggtggaacctgaataacatggccatgatgacaccatcagtgctgacccatgtcactgct
gatatctgtggcatgactttgccatggctctatgtgggcatgtgcttctcctcattctgc
tggcacattgaggaccactggagctattcaatcaactatctgcactggggagaacctaag
acctggtatggagctcctggttttgccgctgagcagttggaagcagtcatgaagaaactg
gccccggaactgtttgagtctcagccggatcttctacaccagctcgtcacaatcatgaac
cccaatacactcatggcccatggagtaccaatttacagaaccaatcagtgcgcgggagag
tttgtcatcacttttccgcgatcctatcatagcggcttcaaccagggcttcaacttcgca
gaggctgtgaatttttgcacggtggactggatgccactggggcgtcagtgtgtggatcac
taccgcctgctgcaccgttactgcgtgttctcacatgatgagatggtgtgtaatatggcc
atgaaggccgacaacctggacgtggttctggcgtcagccgtacagaaggacatgcagctc
atgataagagaggagagagagctacgggacaaagtccgaaagatgggggtggtccagtgt
gagttgtttgaatatgacttgctggcagatgatgagagacagtgcgtgaagtgtcgtacc
acctgttacctgtctgctctcacctgcccctgtagaccaggagtccaggtgtgtctacac
cacgtccacgacctctgctcctgccctgtctccaactacacactcaattaccgttacaca
ctggatgacctttaccccatgatgaacgctgtgcggcagagggcggagtcttatgacgag
tgggcgtcaagggtgacagaggtcatggaagcaaagctagacaagaaacgcaatgtcacc
gtgtttcgcacccttttagaggagtctgatgagaagtcattcccagagaatgatctgtta
cgtcagctgaggctagttactcaagatgctgagaaatgctcatctgttgctcagcaactg
ctaaacggcaagaggcagaccaggtatcgcacaggcgggggtaaatctcctaatcagctt
actgtggaggaaatgagatcatttgtccgccagctttataacctgccctgcagcctgaca
caggcaccgcttctgaaggaactgctgaataacatcgaggatttccagcagcacagtgag
aagcttctctccgatgaagtgagcgcagatgctgttagtgagattgagtctttgctggag
gagggctctcagttcgacgtgtttcttcccgagttgccgctgctgcgggagcgtttggaa
caggctcggtggctggccggagttcagcaggcagaggatccggtatcaaacccctgcggt
ttctctctggacagcatgcgccggctgatcgatcgaggagtcggactgacaccgcatccc
tccactgaacgcacgatggctcggctgcaggagctgctcacgatctcagaggagttggag
gagaaagcgcaggcactgctgaaggccaggcctctagagagtttagagacgcttggttcg
atgttgactcaggtggagggggtacctgcatacctaccaaactgcctcctactacaagac
acagtgaacagggctaaagaatggctccaggaagctgaggatttacaggtgggaggtcag
actccggttctcggctcgctctctgatatggttctgagagctcatgctattcctgtgcga
ctggagcctctggaccagctggaggttctggtatcagaggtgcagtcctggaaagagtca
gcagcaaaaaccttcctcgtcaaaaactccccctttacactgttggaggtcttgtgtccc
cgatgggaagtgggcagctctttgaaaaagaagatgaggaaggtgaagggagagtttgtg
tcatcagggaagaagaagcttgtgaagctggacagtatgagtgatgttgagagagcactt
tcagacagcaaagactctgcatccgctatgtttactctggctgaggttcgtttaaaagag
ttggagtcactatgttctctccgtgcagctaatgaatcgaagctcctgcctacagcagac
tgctctgctctcaaagtgtgtgtgtgtcagaagccagccatgggcgccatgctgcagtgc
gagctgtgtcgagatgctttccacagcgtgtgcgttcgtgggccctcggatcccctcgac
cctgaagcctggctgtgtccgttatgcctacggtcgactaagcctcctctggacaagatc
ctgacacttttgtcatcactgcagcggatccgtgtgcgtctcccggagggtgacgctcta
cgttatatggttgaacgcgctgtcagctggcagcgaagggcacgagaggtcatagactct
tatgagctctcgctgacctctcaggattgcagagtagcttcacctacacagagacaccgg
accgctgggcacaacaggaagcagcagtgtggatctccatctcagagtcaggactggcgt
gtttctgggcaggagcagacggtgttttacacagagcaacgctgtatccctctccagggt
ctcagttctgagttggaggaactgatggtggagggtttgctcctgcaggtttctctcccc
gagacccagcagctctacagacttctgctgtctggcctcccgaccacaaacatgtcccac
acagaacacacaccctacctcacacagaaacactcctcgccgcagagagagagagatgca
atcacttcagcagaaaagaaagccaagcggcgaatgaacagagaggatactgagatcagg
gatagagggataaagccgaaaagcaagaagcagagaatgggtacagagaagcggagagag
aggaaagcggcatctgtctctgcatcagacgtgtctcagtcggaagactcagaggaggat
atgaccctgtgtccagcagagagctgtctccagccggaaggggaagaggtgtactgggtg
cagtgtgactgctgtaaccgctggttccacatgatatgtgtgggggtatcggcagaactc
gcagccgaggaggattacatgtgcgtgacatgcagcacaaccaacgcgacccgccggaag
tga

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