Massilia antarctica: IV454_00025
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Entry
IV454_00025 CDS
T08186
Name
(GenBank) putative Ig domain-containing protein
Organism
manc
Massilia antarctica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
He_PIG
HCBP_related
RTX_C
LapA
Motif
Other DBs
NCBI-ProteinID:
QPI50074
LinkDB
All DBs
Position
complement(3890..13252)
Genome browser
AA seq
3120 aa
AA seq
DB search
MMIERNKSDVTGIAPYPNLMFYDTVTDTTLRSGSPDSGDAGRRQILFGGEYGNVLTGGDK
YDEIYGDDGDDTLGGGGGNDYIEGGAGDDKLDGGTGSDWLRGGSGRDTYSFGAAFGNDTI
VDSDGVGKIEIAGSVITDGKGVGKRNQWVAQLASGEYVGMAVYDASSSVTGKRMIMTKGL
DSSNAVTIDNFDLAKALSSEGYLGIKLESQSKVALKIGPGKNVYNEPGFVESSLAAQLAT
ISEGGAATFTMSLSAAAGAHETVTLSLSGVSGKLMVMVDGALVAAEGAVIALSEGQTEVV
FALVQRGDFEGDVPGTLKASHNGPGGVASTNTIALSLKDTGKSTFTIIGDQHAPAGKTSA
DLYNWSAVTFLADGTLVGGVAEANFSDVLMGGGVKNKIFGLGGNDLIDGGEGDDMIDGGD
GDDMIAGSQGNDHILGGKGNDYISSASPSNGQRRLSPDQMWTPPAGKTAIAAGAAWGVYD
SGKGSNIWDGVDSSYYADNDFVDGGEGDDRIIGSHGDDQLLGGAGSDVLWGLSGNDDIEG
GGDDDHLFGDGYHADPQLLIYQAPEHHGADFLDGGAGNDRLVGQGSSDVLYGGIGNDVLF
GDTGGGPTSDPDYIPFQYQGNDYLDGEEGDDWLYGEGKDDTLYGGAGKDTLWGDMSASTL
SPGDDALYWGRDVLDGGAGDDILVGGGKDDQLYGGTGNDKLWGDENIKSFNQEFSGNDFL
DGGDGDDQLVGGGGGDRLLGGAGNDRLIGDDDEFVPAAFQGDDYLDGGAGDDMLAAGLGN
DTLFGGAGNDTLNGGGGADYMVGGAGNDIYVIDSDGDIIVEEGRQKAGAGTGARGATLPA
PGDARADEPGTNDVEASISYTLGAHLDAIRLTGINAIDATGNSASNGLFGNGAANVLTGA
AGDDYLVGGGGNDVYVFDRGDGKDTIENTDVLSDSADPARAPAVDILRFGANVSERDIVA
YRDGDILSLRISGSSEQVNILDYFAANKVDGTVTSDRKLDRIEFANGVVWNPAKIDAILL
RQANNQAPVAGPGVPFLSARAGDPFSYTLAAANLTDPDADDKLHYSIQLEGGLPAPAWVK
FDAATRTVSGVPDDASVGKLVLIVVAMDNYGAGAGIGIAMNIGAANRKPVLNAVPVDAKA
SRGTPLTYNVPANVFTDPDGDALTYKVTLEKGGSLPSWLSFNPKTGVLSGTPSTLEHLVL
AITATDVHGLSAQTLMKLDVDNRAPTFGAWTQVPGGAANDVWQFTVPQGSFTDSDRGDTL
SYAATSPDGSALPAWLTFDAATRTFSGRPPAVGKYDVLVKASDINGASVSAVLPITIDPN
QVYSGTDAADVKEGGWGHDSLKGLGGNDTLLGSFGNDRLDGGAGNDLLKGGGGADTYVFG
KGYGNDTIDNQDLPLQAGIDTIEFLPGVAVGDVKPTRADNDLILSLPASGDSLRVLNYFK
ADELALSQVEFIKFADGTSWTLAQILPFLLVGSAGNDKLYGSDTNDMLDGGAGNDRLDAG
AGNDTLAGGTGSDDLIGGTGADTYRFNKGDGKDTISDVSPVVTVPDVDRLEFGAGLMPAD
VEAVRDGATLRLNFGNSGDAVTIWSYFSTRTDLNLAVEQIAFADGTLWTTPMVLQQVLKG
TDLDDKLEGTAGNDVISGRKGQDSLLGLQGNDTLSGGAGNDTLDGGVGDDVLDGGAGRDR
MVGGAGNDIFKFGHGDGPDVIVTGDTAPGKIDTIRFADDVLASDVLVERWKDRLVLIISS
SGDTLFVEDYFREVNGVRTGKIEQVQFADGSSWNTAAVDQMAVPHSNTQPYIRQTGGDFY
GNVNSTFNTVMPLDWHLEVDVGDALSYSIEALPGYPAVPAWLHFDPLTMKMWGTPGANDQ
GVSSVYFYATDLYGAKAGISINIHVGAVSVAPTVASPVADQLTSQGTSIRFSLGDVFADA
DQGDVVAYSATLSTGAVLPTWLTFDPVAREFSGMSAAAGTLSVKVTGTDLGGKSASDVFD
IVVAPDSIITGTAGNDTLKGGAGNDIVRGLGGNDELESGLGRDTLEGGAGDDTYLINHDD
DTVVENVNEGIDTVRTALPKYTLPANVDNLVFNGEVAGILTGNNLNNQLSAGAGAQTIDG
GAGADTMAGGAGDDRYVVDSVLDNIVELPDGGNDTITSSLSLTLPVNVEALELTGTENID
ATGNAANNKIRGNAGNNRLDGAGGRDDFYGGDGDDTYVVDSIDDWISDDSGNDTVETSIS
SPNLLSGSVENLTLTGAALSRFGNALNNIIKGNALNNTLNGLEGNDQLFGAGGDDTLSGG
AGNDVYVVERGDGKDVILNDDVASAVDTLRFGKDIAEGDIWVQRSGENLLLLLRGTTDQV
TFSKYFAADVTKDGAIVNNKIERVEFAGGVVWDQAKIQSLVDISSANKVPVRGPVSVAPF
KAEVGKPLSFALAANTLVDPDPLDTFVYSASLANDVPLPAWLKFDVASRTFSGTPTVADV
GSVPVKLWGTDNRGGRGYIDLPLVVSPANRTPVLAAALADQSNALGTAFSYVVPAGAFTD
PDAGTVLSYSATMADGTALPAWLSFNATTRAFGGTPPAAGTFSVKVSARDSGNLSASDVF
DLVVSVKNLTLTGTAGADQLNGGAGNDILNGLDGNDKLNGGGGNDTMDGGLGTDTMTGGA
GDDVYVFDLAADVAVEAANEGNDTVKSSVSTVLGNNIEALTLTGTAPLNATGNALNNVLT
GNSGDNTLDGGSGADILNGGSGNDLYIVDNVGDIVNEGNYVGVDTVQTGLNYDLGPYLDN
LTLTGSLAVDGKGNAGNNVIKGNANNNVLDGGSGADALSGGAGNDTYIVDNASDTVVELA
NEGIDTVKSGVSSTLSANIEALFLTGVNGISGTGNALNNLLVGNGANNVLNGDAGDDLLQ
GGAGLDTLTDTLGNNLLDGGAGNDTLTAGVGREMLIGGAGNDVILTGDGADIIAFNRGDG
QDVVNASTGKDNTVSLGKGVLYADLLFKKTANDLVLVTGAAEQITFKDWYAAPANRSVAN
LQVVIEGGSDYDAASASKLNNKKVEQFNFDGLAGAFDAARTANPALTSWALSSSLLSFYL
SGSDTAALGGDLAYQYARTGNLSSMSMLPAGALLSSPAFGVTAQPLQAGSALRDLSPQLV
NT seq
9363 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgagaggaataagtccgacgtgaccgggattgcgccctacccgaatctgatg
ttctacgataccgtcaccgataccaccttgcgctccggaagtcccgattccggcgacgcg
ggacgacgccagatcctgtttggcggtgaatacggcaacgtgctgacaggcggcgacaag
tacgacgagatctacggcgacgacggcgacgatacgctcggcggcggcggcggcaacgat
tacatcgagggcggggccggcgacgacaagcttgacggcggtacaggcagcgactggctg
cgcggcggcagtggccgcgatacctacagctttggcgccgcgtttgggaacgacaccatc
gtcgacagtgacggtgtgggaaaaatcgaaatcgccggtagcgtgattacggatggaaaa
ggcgtcggcaagcgcaaccaatgggtcgcccaattggcctccggcgagtacgttggcatg
gcggtgtacgacgcctcgtccagtgtcacgggcaagcgcatgatcatgaccaagggactc
gacagcagcaacgcggtcacgatcgacaatttcgacctggcgaaggcattgagcagcgag
ggatatcttggtatcaagctcgagagccagtcgaaagtcgccctgaaaatcgggccgggg
aaaaacgtgtataacgaacccggctttgtcgaatcgagcctggcggcgcagctggcgacc
atcagcgaaggcggcgccgccaccttcaccatgtccttgagcgcggcagccggcgcgcac
gagacggtcacgctgtcgctgtccggcgtcagcggaaaactgatggtgatggttgacggt
gccctggtcgccgccgaaggcgccgtcatcgcgctcagcgaaggtcagaccgaagtcgtt
ttcgcgctggtccagcgcggtgattttgaaggcgatgtgccgggaacgctgaaggccagc
cacaacggcccgggcggcgtcgcgagcaccaataccattgcgctcagtctgaaagacacc
ggaaagtccacctttaccattatcggagatcagcacgctcctgcgggaaagaccagtgcc
gacttgtataactggtccgcagtgacattcctggccgatggcaccctggtcggtggcgtc
gccgaggcaaatttttccgacgttctaatggggggaggcgtcaaaaacaagatttttggc
ctgggaggcaacgatctgatcgatggcggcgaaggcgacgatatgatcgatggcggtgac
ggagacgacatgatcgccggcagtcagggcaacgatcacatcctcggcggcaaaggcaat
gactatatcagcagcgcttcgccttccaatggacagcggcgtctgtctccggaccagatg
tggaccccccccgctggcaagacagccatcgccgccggcgcggcctggggtgtctacgat
agtggaaaaggcagcaatatatgggatggtgtggattcatcttactatgcagacaatgat
tttgttgacggtggcgagggcgacgaccgtatcatcggaagtcacggtgatgaccaactc
ctcggtggagccggaagtgacgtgctctggggcttgtcgggcaacgacgatattgagggc
ggcggcgacgacgaccatctcttcggggatggatatcatgcagacccgcaactgctgatt
taccaggcacctgagcaccatggtgccgacttcctggacggcggcgctggcaacgatcgc
ttggtcggccagggatcgagcgacgtgctgtacggcggtatcggcaatgacgttctgttt
ggcgacaccggaggcggcccgacgagcgacccggactacattcctttccagtaccagggc
aacgactatctcgacggcgaagagggcgatgattggctgtacggcgaaggcaaggacgat
accttgtatggtggcgcgggcaaggatacgctgtggggcgacatgtcggcctctaccctc
tcgcccggtgacgatgccttgtattgggggcgcgacgtgctcgatggcggagccggcgac
gatatcctggtcggtggcggcaaggatgaccagttgtatggcggcaccggcaacgacaag
ctgtggggtgacgagaacatcaagagtttcaaccaagaatttagcggcaacgactttctc
gacggcggcgacggcgacgaccagctggtcggcggcggcggcggcgaccgcctgctcggc
ggcgcgggcaatgatcgcctgatcggcgatgacgatgaattcgttcccgcagccttccag
ggagacgactatctcgatggcggcgccggcgacgatatgctcgccgcgggccttggtaac
gatacgttgtttggcggcgcaggcaatgacacgctcaacggcggcggcggcgccgactac
atggttggcggcgccggcaacgacatctacgtcatcgacagcgatggcgatatcattgtc
gaggaggggcgccagaaggccggcgccggcaccggtgcgcgcggagcgacgctgccggcg
cccggcgacgcccgcgccgacgagccgggcaccaacgatgtcgaagcaagcatcagctat
acccttggcgcgcacctcgacgccatcaggctgacgggaatcaatgcgatcgatgccacc
ggcaacagcgccagcaatgggctgttcggcaatggcgcagccaatgttctcaccggtgcg
gcaggcgacgattacctggtcggcggcggcggcaacgacgtctatgtattcgaccgcggc
gatggcaaggatacgatcgagaacaccgatgtcttgtccgacagcgccgatcccgcgcgt
gcgccggccgtcgacatcctgcgcttcggcgccaatgtgtccgagcgcgatatcgtcgct
taccgtgatggcgatatcctgtcgctgcggatcagcggttcgagcgaacaggtcaatatc
ctcgactacttcgcggcgaacaaggtcgacggcacggtcacatccgaccgcaagctcgat
cgcatcgaattcgcgaacggcgttgtctggaacccggcaaagatcgacgccatcctgctg
cgccaggcgaataaccaagccccggttgccggtcctggcgtcccatttcttagcgcgcgc
gctggcgacccgttcagctacacgctcgctgcggccaatctgaccgatccggatgcggac
gacaagctccattacagcatccagctggagggcggcctgccggcgcctgcctgggtcaaa
tttgacgctgcgacccgtacggtgtccggcgtgcccgacgacgccagcgtcggcaagtta
gtgctgatcgtcgtagcgatggacaattatggcgccggtgccggtatcggcattgctatg
aatatcggcgcagccaatcgtaagcccgtattgaacgctgtcccggtcgatgcgaaggcg
tcgcgcggcacgccgttgacctacaacgttcccgctaatgtattcacggatcccgacggt
gatgcgctgacctacaaggtgaccttggaaaaaggcggcagcctgccatcctggttgagc
tttaatcccaagacgggcgtactgagcggtacaccgagcacgctcgaacacctggtgctt
gccatcaccgccaccgacgtgcatggcctgagcgcccagaccttgatgaaactcgatgtc
gacaatcgggcgccaacgttcggcgcctggacgcaggtgccaggtggtgccgccaacgat
gtgtggcagtttacggtgccgcaggggagtttcaccgacagcgaccggggcgataccctg
tcctacgccgccacgtcgcccgatggcagcgcgctgccggcatggctcacattcgatgcc
gccacccgcacgttttccggccgcccgccggcagtgggaaagtacgatgtgctggtcaag
gcaagcgacatcaacggcgcaagcgtatctgctgtgcttccgatcaccatcgacccgaat
caggtctactccggcaccgatgcggccgatgtgaaagagggcggctggggccacgatagc
ctcaagggtctgggcggcaatgacaccttgctcggctccttcggcaacgaccgcctcgat
ggcggcgccggtaacgatttgctcaagggtggcggcggtgccgatacttatgtcttcggc
aagggctacggcaacgacaccatcgacaaccaagacttgccattgcaggctggcatcgac
accatcgagttcctgcctggcgttgcggtgggcgacgtcaagccgacccgcgccgacaac
gaccttatactgagcctgcctgccagcggcgacagcttgcgcgtgctgaactacttcaag
gccgacgagcttgcgctgtcgcaggtcgagttcatcaagttcgccgatggtacaagctgg
actttggcccagattcttccattcttgctggtgggctccgccggtaacgacaagctgtac
gggtccgacaccaacgacatgctcgacggcggggccggcaacgaccggctcgacgctggc
gcgggcaacgataccctggccggcggcaccggcagcgatgaccttatcggcggtaccggt
gcggacacctaccgcttcaacaagggcgacggcaaggatacgatctccgatgtcagtccg
gtcgtcactgtgccggatgtggaccggctggaattcggtgccggtctgatgccggccgat
gtcgaggccgtgcgcgatggcgccaccttgcgcctcaatttcggcaacagtggtgacgcg
gtcaccatctggagctatttcagcacgaggaccgacctgaatctggcggtcgagcagatc
gcctttgccgacggcaccttgtggaccacgcccatggtcttgcagcaggtactcaagggc
accgacctggacgacaagctggaaggcactgcgggcaacgatgtcatcagcggccgcaag
ggccaggatagcttgctcggcctgcagggcaatgacaccctgtccggcggagcaggcaat
gacacgctcgatggcggcgttggcgacgatgtgctcgacggcggcgccgggcgcgaccgc
atggtgggcggcgccggcaacgatatcttcaagttcggccacggtgacggtccggatgtg
atcgtcaccggcgacacggcgcccggaaagatcgacaccatccgcttcgcagacgacgtg
ctggccagcgatgtgctcgtcgagcgctggaaagacaggctggtgctcatcatcagcagc
tctggcgataccttgttcgttgaagattatttccgggaagtgaatggagtacgcaccgga
aagatcgaacaggtgcaatttgccgacggcagcagctggaatacggctgccgtcgaccag
atggcggttccacactccaacacgcaaccgtatataaggcagacggggggcgatttttac
ggtaacgtcaacagtactttcaacacggtgatgcctctggactggcatctggaagtcgat
gtgggtgacgccctgtcctacagcattgaggccttgcctggctatcctgccgtgcccgca
tggctgcacttcgatccgctcaccatgaagatgtggggtacgcccggcgcgaacgaccag
ggcgtgtcctcggtctacttttatgccacggatctttacggcgcaaaggccggcatatca
atcaacatccatgtcggcgcggtaagcgtcgcgccgacggtagcgtcgcccgtagccgat
cagctcacgtcgcaaggaacgtccatccggttcagcctcggtgacgtgtttgccgacgcg
gatcagggcgacgtggtcgcatacagcgccaccttgagcacgggcgccgtgctgcccaca
tggttgaccttcgatccggttgcgcgtgagttcagcggcatgtccgccgccgccgggacc
ttgagcgtgaaagtcaccggaaccgatcttggcggcaagtcagcctcggatgtcttcgat
attgtggtcgcgccggacagcattattactggcactgccggcaacgataccttgaaaggc
ggcgccggcaacgacatcgtcaggggcctcggcggcaacgatgaactcgaaagcggctta
gggcgcgacaccctggaaggcggcgccggcgatgatacctacctgatcaaccacgacgac
gataccgttgtcgaaaacgtgaacgagggcatcgatacggtgcgcaccgcgttgccgaag
tacacactgccggccaatgtcgacaaccttgtgtttaacggcgaggtggcaggaatcctg
acaggtaataacctcaataatcaactcagcgcgggggcgggggcccagaccatcgatggc
ggcgcgggagccgataccatggccggcggtgccggcgatgaccgctatgtggtcgacagc
gtgctcgataacatcgtcgaactgcctgacggcggtaacgatacgatcacgtcaagcctg
agtcttaccttgcccgtcaacgtggaagcgctggaattgacggggaccgaaaacatcgat
gccaccggcaatgctgccaacaataaaatccggggtaatgcggggaataaccgcctcgac
ggtgccggcggccgcgacgatttctacggcggcgatggcgacgatacctatgtcgtcgac
agcatcgacgactggatttcagacgacagcggtaacgacacggttgaaacaagcatcagc
tccccaaacctgctgtccggcagcgtcgagaacctgaccttgaccggtgccgcgctctcg
cgcttcggcaatgcgctcaacaacatcatcaagggcaatgccctgaataacacgctcaat
ggcctggaaggcaatgatcagctgttcggcgctggcggcgacgataccttgtccggcggg
gcgggcaatgacgtgtatgtcgtcgaacgtggcgatggcaaggacgtcatcctcaatgac
gatgtggccagcgcggtcgataccctgcgtttcggcaaagacatcgcggagggcgacatc
tgggtgcagcgcagcggcgaaaacctgctcctgctgctccgcgggaccacggatcaagtg
actttctccaagtacttcgccgccgacgtgaccaaggacggcgccatcgtgaacaacaag
atcgagcgggtcgagtttgccggcggtgtggtatgggaccaggcaaaaatccagagcctg
gtcgatatctccagcgccaacaaggtgccggtacgcggcccggtgagcgtggcgccgttc
aaggcggaggtcggtaaaccgctgagcttcgccctggcagccaataccctggtcgacccg
gatcctttggataccttcgtctacagcgcgtcgttggccaatgacgtgccattgccggcc
tggctgaagttcgatgtggcctcgcgtaccttcagcggcacgccgaccgtcgccgatgtg
ggctcggttcccgtcaagctgtgggggaccgacaaccgtggcgggcgaggctacatcgac
ctgccgctggtggtcagcccggccaaccgcacgccggtgctggccgccgcgctggcggac
cagtccaacgccttgggcaccgcattcagttacgtggtgccggctggcgcattcaccgat
ccggatgcgggaacggtgctcagttacagcgccaccatggccgacggcacggctttgccg
gcctggctgtcgttcaatgccactacccgggcatttggcggcaccccgccggctgccgga
accttcagcgtgaaagtgagcgcgcgggatagcggcaatctgagcgccagcgatgtcttc
gatctcgtcgtcagcgtgaaaaacctcaccttgaccgggaccgccggcgccgaccagttg
aacggtggtgcgggtaacgatatcctcaatggcctggacggcaacgataagctgaacggc
ggcggcggcaacgacaccatggatggcggcctcggtaccgacaccatgaccggcggcgcg
ggcgacgatgtgtacgtgttcgacctggcggccgacgtggcggtggaagccgccaacgaa
ggcaatgacacggtcaagtcgagtgtgagcacggtcctgggcaacaacatcgaggccctg
accctgaccggcacggcgccgctcaacgccaccggcaacgcattgaacaatgtactgacc
ggtaactcgggcgacaacacgctcgacggtggtagcggcgccgatatcctcaacggtggc
tccggaaacgatctctacatcgtggacaacgttggcgatatcgtcaacgagggcaattac
gtcggcgtcgataccgtgcagacgggcttgaattacgacttgggcccctacctcgacaac
ctgaccctgaccggtagcttggcggtcgatggcaagggcaatgccggcaacaacgtgatc
aagggaaatgctaacaacaacgtgctcgatggtggcagcggggcagacgcactcagcggc
ggcgccgggaatgacacctatatcgtcgacaatgccagcgataccgtggtcgaactggcg
aacgaaggcatcgataccgtcaagtccggcgtgagcagcaccctgagcgcgaatatcgaa
gcgctgttcctgacgggcgtgaacgggattagcggcaccggtaacgcgctcaacaacctg
ctcgtcggcaatggtgccaacaatgtgctgaacggggacgcgggcgacgacctgcttcag
ggcggtgccgggctcgatacgctcaccgataccctcggcaataatctgctcgatggtggc
gccggcaacgacacactcaccgccggcgttggcagggagatgctgatcggcggtgccggc
aacgatgtgatcctcactggcgacggggccgatatcatcgctttcaaccgcggggatggg
caggatgtggtcaatgccagcaccggcaaggacaataccgtttccctgggcaagggcgtg
ctgtacgcggatttgctgttcaagaaaaccgcaaacgacctggtgctggtgacgggcgcg
gccgaacagatcaccttcaaggactggtacgcggcgcctgccaatcgcagcgtcgccaat
ctgcaggtggtgattgaaggcggcagcgactatgacgccgcgtcggccagcaagctcaac
aacaagaaagtcgagcagttcaactttgacggtctggccggggcgtttgatgctgcccgc
actgccaatccggcattgacgagctgggccctgtcgtcctccttgctcagtttttacctg
agcggcagcgacacggcggcactgggcggcgaccttgcctaccagtacgccaggaccggc
aatctgtcatcgatgtcgatgctgccggccggcgctttgttgtcgagtccggcgttcggt
gtcactgcgcaaccattgcaggcgggttcggcattgcgcgacctgtcgccacagcttgtg
taa
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