Massilia antarctica: IV454_11410
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Entry
IV454_11410 CDS
T08186
Name
(GenBank) RHS repeat protein
Organism
manc
Massilia antarctica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6861
RHS
DUF6531
Motif
Other DBs
NCBI-ProteinID:
QPI52047
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All DBs
Position
2513655..2518166
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AA seq
1503 aa
AA seq
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MSTSDSPNHFFDFQRALKDLGRAYDSAGAQVRQDIDRRLQRWSHRVADSVDSVGRAAMRI
EAVRCTVAVGLAIDGAEHRFQELLKTQLEGLDFSQIWGVLWGVVKEVVLYVGGGAALGGT
VGGVAGAFAAGAGAVPGAIGGAALGAQIGGEILVWMGLGSLVLYIGETIPTMCGKMAEGF
ATAWHAGELPDSARGQYAAQLRLASESFAQGKLLLVKAILAAIVLYLSRGQASKSMLMKE
LGKSKLGPGFADWVVANEAKLMKHPALQPRIAAAEGEAASAAKAGAGKASPAAEPAKPAE
PAKPADEPPANEGKARRPCPACLLVGQPVNPLSGSKILAGELDLDFALPAALGLVWQRSY
SSAQGRAGWLGPGWSTPISDALEVGAGQVVVLDAWQREVTFSLPQVGASVYSPSEKISLA
RTGERSFELIDEDGLRRQFAMAATASGIARLVGLVDANGNQLGIGYDGQLPQRIEDSAGR
VFLLAFGEHGGAARLDTIVLLPEAGGQGEVLVRYAYDADGNLVEVRNRLDQVTRRFAYRQ
HLMIEHAQPDALVSRYEYDQDGPGARVVRNWTNNGLSWNFRYLARETVVTDKLGREQRYR
FDAEGGFIGHVDAEGGVTERRLDGNGRLLAIVDPGGRAIGLRYDARGRVVRVERDGKGTG
IVYDARFAKPALITDALGASTALRYDERGNLLSVTNALGQRTAYQYDEAGLPVRLTDAAG
GVKRLAYNRAAQLTAYTDCSGNTTRFSYDGNGTLLRTTDAQGNATTYTCDPLGRLLAVVQ
ADGATERYEYDALGRLLARIDPAGQRTSYVLDSDGKPLKRIDARGGVVEYRYDPVRRMVA
LINENGDAHRFVYDALDRLSEETGFDACLTRYRYDGSGLLVAKEEHGSGARTEFTRIDTG
FVRDSAGQLVEKIITRSTGPAQAEQLRLRYAYDDAGRMIRAINADAEVAMQYDAVGQLVA
EQTDSGGESTVLRHAYDELGNRIETVLPDGRVLNHLFYGSGHLHQINIDGEVITDIERDQ
LHRPVSRTQGALASTFRYDPVGRLLSQVAARSGAGEGGEPLIARQYDYDESGNLLAIDDR
RNGRTSYSYDVLGRILSALQPQSDERFAFDPAHNLLDGSIAGAGRIEGNRVRVFEDKRYD
YDAHGNLSEKLVGRHTRMRFTWNAAHQLVKAVVTRQAGAAAPTVQTVTYAYDPFGRRIAK
RDAFATTRFAWDGNRLLRETRGMYSRTYLYEPASFVPLAHIDAPLPAGTAQDAPQVAYLH
ADQVGTPREMTDAQGRVSWAGQYKAWGNVLMIDVPAAFSQAIDAQQADLHEQRIRFQGQY
ADAETGLNYNRFRYYDADVGRFISSDPVGLLGGMNLYQYAANPSGWVDPLGLAGFLFRGD
NAYSGGPIGQPMQGGVTANDIWQHVTSKGDGSLTSFSEQLKNGNGTRGATFFGDPVKVSK
DAIADLVAEGKLQTITPEQAKEIMKADPKLKAKANDVVQIMKKNNEVLVRGEVPGEIVVK
CKC
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctccgattcccccaatcattttttcgacttccagcgcgccctcaaggatctc
gggcgggcctacgacagcgccggcgcccaggtccggcaggatatcgaccggcgcctgcag
cgctggtcgcaccgggtggccgactcggtcgattcggtcgggcgcgccgccatgcggatc
gaggcggtgcgctgcacggtcgcggtcgggctggccatcgatggcgccgagcaccgtttc
caggagttgctcaagacccagctcgaaggcctcgatttttcgcagatctggggcgtgctg
tggggcgtggtcaaggaagtggtgttgtacgtgggcggcggcgcagccctgggcggcacc
gtgggcggcgtggccggggcctttgccgccggcgccggcgcggtgccgggcgcgatcggg
ggcgcggccctgggcgcccagatcggcggcgaaatcctggtctggatgggcctgggcagc
ctggtgttgtatatcggcgaaaccattcccacgatgtgcggcaagatggccgaaggcttc
gccaccgcctggcatgccggcgagctgcccgacagcgccaggggccagtacgcggcccag
ctgcgcctggccagcgaatcgttcgcgcagggcaagttgctgctggtgaaagcgatcctg
gccgcgatcgtgctctacctgtcgcgcgggcaagccagcaagtccatgctgatgaaggaa
ttgggcaagagcaagctcggtccgggcttcgccgactgggtggtggccaacgaggccaag
ctgatgaagcacccggcgttgcagccgcgcatcgcggcagccgagggcgaagcggcatcg
gctgccaaggcgggcgcgggcaaggccagcccggcggccgagcccgcgaaaccggcggag
ccggccaagccggccgacgagccgccggccaacgaaggcaaggcgcgccggccttgtccg
gcctgcctgctggtgggccagcccgtcaatccgctttccggcagcaaaatcctggcgggc
gagctcgacctggacttcgcgctgcccgcggccctggggctggtgtggcagcgcagctac
agctcggcccagggccgcgccggatggctggggccggggtggagcacgccgatttccgat
gccttggaagtgggcgccggccaggtcgtggtgctcgacgcctggcagcgcgaggtcacg
ttttcgctgccccaggtgggcgcatcggtctactcgccgtccgaaaaaatcagcttggcg
cgcaccggcgaacgcagtttcgaactgatcgacgaggatgggctgcgccgccagttcgcc
atggcggcgacggcgagcggtattgcgcgcctggtcgggctggtcgatgccaacggcaac
cagctcggcatcggctacgacggccagctgccgcagcgcattgaagacagcgccggccgc
gttttcctgctggcgttcggcgagcatggcggcgcggcgcgcctcgacaccatcgtcctg
ctgccggaagccggcggccagggcgaggtgctggtgcgctacgcctacgatgccgacggc
aacctggtcgaagtgcgcaaccgcctggaccaggtcacccgccgcttcgcctaccgccag
cacctgatgatcgagcacgcccagccggacgctctggtgtcgcgctatgaatacgaccag
gacggcccgggtgcgcgggtggtgcgcaactggaccaataacggcctgtcgtggaacttc
cgctacctggcgcgggaaacggtggtgaccgataagctggggcgcgagcagcgctaccgt
ttcgacgccgagggcggctttatcggccacgtcgacgcggaaggcggggtcaccgagcgt
cgcctcgatggtaacggcaggctgctcgccatcgtcgacccgggcgggcgcgcgatcggt
ttgcgctacgatgcgcgcgggcgcgtggtgcgggtggaacgcgacggcaagggcaccggc
atcgtctacgatgcgcgcttcgccaagccggccctgatcaccgatgcgctcggcgccagc
acggcgttgcgctacgacgagcgcggcaacctgctgagcgtgaccaatgcgctcggccag
cgcaccgcttaccagtacgacgaggccggcttgccggtcaggttgaccgacgccgccggc
ggcgtcaagcggctggcctacaatcgcgccgcgcaattgaccgcctacaccgattgctcc
ggcaatacgacgcgcttcagctacgacggcaacggcacgctgttgcgcaccaccgatgcc
cagggcaatgcgaccacctacacctgcgacccgctcggacgcctgctggcggtggtgcag
gcggacggtgccaccgagcgttacgaatacgatgcgcttggccgcctgctggcgcgcatc
gatcctgccgggcagcgcaccagttatgtgctcgacagcgacggcaagccgctcaagcgc
atcgatgcgcgcggcggcgtggttgagtaccgctatgacccggtgcggcggatggtggca
ttgatcaacgaaaatggcgatgcgcaccgtttcgtctacgacgcgctcgaccgcctgagc
gaagagaccggattcgatgcgtgcctgacccgctaccgctacgacggcagcggcctgctg
gtggcgaaggaagagcatggcagcggtgcgcgcaccgagttcacccgcatcgacaccggc
tttgtgcgcgatagcgccgggcagttggtcgagaagatcatcacgcgcagcaccgggccg
gcgcaggcggagcaactgcgcttgcgctacgcctacgacgatgccggccggatgatccgc
gccatcaacgccgacgccgaggtggcgatgcagtacgacgccgtgggccagctggtggcc
gagcagaccgacagcggcggcgagtcgactgtactgcgccacgcctacgatgaactgggc
aaccggatcgagacggtgctgccggacgggcgtgtactgaatcatctattttatggttca
ggccacctgcaccagatcaatattgatggcgaggtcatcaccgacatcgaacgcgaccag
ctgcaccgtccggtcagccgcacccagggcgcgctggccagcacgttccgctacgatccg
gtgggacggctgctgtcgcaggtggccgcacgcagcggcgcgggcgagggcggcgagccg
ctcatcgcacgccagtacgactatgacgagagcggcaatctgctggccatcgacgatagg
cgcaacgggcgcacgagctacagctacgatgtgctcgggcgcattttgtcggccctgcag
ccgcagtccgacgagcgctttgcattcgaccccgcgcacaatctgctcgacgggagcatt
gccggggctggccggatcgagggcaaccgtgttcgcgtgttcgaggataagcgctatgac
tacgacgcccacggcaacctgagcgagaagctggtcgggcgccatacgcgcatgcgcttc
acatggaatgccgcgcatcagctggtcaaggcggtggtgacgcgccaggccggcgccgcg
gcgccgacggtgcagacggtgacgtatgcctacgatccgttcgggcgcaggattgccaag
cgcgatgcgttcgcgacgacccgcttcgcgtgggacggcaatcgcctgctgcgcgagaca
cggggcatgtacagccgcacttacctgtatgagccggcatcgtttgtaccgctggcgcac
atcgacgcgccgctgccagccgggacggcgcaggacgcgccgcaagtggcgtatcttcac
gccgaccaggtgggcacgccgcgcgaaatgaccgatgcgcagggccgggtcagctgggcg
gggcaatataaggcgtggggcaatgtgctgatgatcgatgtgccggcggcgttcagccag
gcaattgacgcgcaacaggctgatttgcacgagcaacgaatccgctttcagggccagtat
gccgatgctgaaaccggattgaactacaacaggttccggtactatgatgccgatgtcgga
cggtttatctccagcgatcctgtcgggctgctgggcggaatgaatctgtaccaatatgcg
gcaaacccgagcgggtgggtcgaccccttgggattggcggggttcctgtttcgcggcgac
aatgcctattccggcgggccgataggtcagccgatgcaaggcggggtgaccgcgaacgat
atctggcaacatgtcacaagcaagggagatggcagcctgacatccttctctgagcaatta
aagaatggtaatggaacccggggcgcgacatttttcggcgacccggtgaaagtgtcgaaa
gacgctattgcggacttggtggctgaaggcaaactccagaccatcacaccggaacaggcc
aaggaaatcatgaaagccgatccgaagttgaaagcgaaggcgaacgatgtggtgcagata
atgaagaagaacaatgaagtgctggtgcgcggggaggtgccgggtgagattgtcgtgaag
tgcaaatgctga
DBGET
integrated database retrieval system
