KEGG   Marisediminicola antarctica: BHD05_13590
Entry
BHD05_13590       CDS       T06401                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mant  Marisediminicola antarctica
Brite
KEGG Orthology (KO) [BR:mant00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BHD05_13590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mant03400]
    BHD05_13590
Enzymes [BR:mant01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BHD05_13590
DNA repair and recombination proteins [BR:mant03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BHD05_13590
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase PaRep2b
Other DBs
NCBI-ProteinID: QHO70526
UniProt: A0A7L5AKD1
LinkDB
Position
2928057..2930537
AA seq 826 aa
MSRAEATPSAPTIVTVDGRRIRLTNLDKILYPETGTTKADVLDYYARVADVLIAHAANRP
VTRKRWVHGVGTQEHPEPSFFQKNLDASTPDWVPRTAIAHRERVIEYPLVNDRATLTWLA
QSAALELHVPQWRFGRTGLLRRPDRLVLDLDPGEGAGLAECAEVARLARLILTGMGLDPM
PVTSGSKGIHLYAALDGSQDPEAVSRVARELARALESDHPDLIVSDMKKALRGGKVLVDW
SQNNQNKTTITPYSLRGRRRPTVAAPRTWRELSSPRLAQLDYREVLDRLSRVGDPLARLS
EGHLAALEPTSTRMAHFEMSAESKDRLEKYRSMRDRAKTPEPVPGPDTAATAEDGSSFVI
QEHHARRLHFDFRLEHDGVLVSWALPKGLPADPRKNHLAVQTEDHPLEYGTFEGIIPAGE
YGAGEVTIWDAGTYELEKWREGKEVIVIVHGEKRGTRKYALIHTGDNKWLIHLMDPHRSG
PMAGGPGTDARASSASESGTPRPAVAPMLATLGTLADVKERDDDWAIEMKWDGIRAIATL
GPDAVTFTSRNRNDLTGSYPDLAEIREAVDDSLLERGPAVLDGEIVVFNSRGRPDFSLLQ
TRMNLSGADARTAAARHPARFVVFDLLEANGGSLVRQPWSDRRALLEHGVTARGPLEVSP
VFDGDADAAIAASSELGLEGIVAKKRDGTYAAGRRSRSWIKVKNSRTQEVVIGGWRAGRG
RRAGTVGSLLLGVPGDGLLHYVGRVGSGFSDRALDNLAARFHGLERQESPFDDVPRADES
DAHWLAPTLVGEVEFAEWTSTGRLRHPAWRGWRPDKNAADVVRETT
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgtcccgagcagaagccaccccgtcggcgccgacgatcgtcaccgtcgacggccgccgc
atccgcctcaccaacctcgacaagatcctctacccggagaccggcacgacgaaggccgac
gtactcgactactacgcgagggtcgccgacgtactcatcgcccacgcggcgaatcgtcca
gtgacgcgcaagcgctgggtgcatggggtcggcacccaggagcatccggaaccctcgttc
tttcagaagaaccttgacgccagcactcccgactgggtgccgcgcacagcgatagcgcac
cgcgaacgtgtgattgagtatccgctggtcaacgaccgggcgaccctcacctggctggcc
cagtccgccgccctcgagctgcacgttccgcagtggcggttcggcaggaccgggctcctc
cgccgccccgaccggctcgtgctcgatctggaccccggtgagggcgccgggctggcggag
tgcgccgaggtcgctcgtcttgcgcggctgatcctcaccgggatggggctcgatccgatg
ccggtcacgagcggaagcaagggcatccacctctacgccgcgctcgacggcagccaggac
cccgaagctgtgtcgcgggtcgcgcgcgaattggcccgcgctctcgagtccgaccacccc
gacctcatcgtgagcgacatgaagaaggcgttgcggggcggcaaggtgctcgtcgactgg
agccagaacaaccagaacaagaccaccatcactccgtactccctgagagggcgccgacgg
ccgacggtcgcggccccgcgaacctggcgcgagctctcctcaccgaggctcgcccagctc
gactaccgcgaggtgctcgaccggctctcacgtgtcggggacccgctcgcccgcctgagc
gagggccacctggcggcgctcgagccgacgtcgacgaggatggcgcacttcgagatgtcc
gccgaatcgaaggaccggctcgagaagtaccggagcatgcgcgaccgggcgaagacgccg
gagcccgtgccggggcccgacaccgccgcgacggccgaggacggctcgagcttcgtgatc
caggaacaccacgcccgccgcctgcatttcgacttccggctcgagcacgacggggtgctc
gtgagctgggcgctccccaaggggctgcccgccgatccgcgcaagaaccacctcgccgtc
cagaccgaggatcacccgctcgaatacggcaccttcgaggggatcatccccgcgggcgag
tatggggctggggaggtcacgatctgggacgcgggaacctacgaactcgagaagtggcgc
gagggaaaggaggtcatcgtcatcgtgcacggcgagaaacgcggcaccagaaagtacgcg
ctcatccacactggcgacaacaagtggctcatccacctcatggatccccatcgctcgggg
cccatggccggcgggccgggaacggatgcccgcgcgtcgagcgcgtcggaatccgggacg
ccacgcccggccgtcgcgccgatgctagccacgctcggtaccctcgccgacgtcaaggag
cgcgacgacgactgggcgatcgagatgaagtgggacggcatccgcgcgatcgccactctg
gggccggatgccgtgacattcaccagtcgcaaccgcaatgacctgaccgggagctacccc
gacctcgccgagatccgcgaggcggtggacgactcgctcctcgagcggggcccggcggtg
ctcgacggtgagatcgtcgtgttcaattcccggggccgtcccgacttcagcctcctgcag
acccggatgaacctcagcggcgccgacgcgaggaccgcggcagcgcggcatccggcccgc
ttcgtcgtgttcgacctgctcgaggcgaacggcgggtccctcgtccggcaaccctggtcc
gatcgccgggcgctgctcgagcacggtgtcaccgcgcgcggtccgctcgaggtgtcgccc
gtgttcgacggagatgccgatgcggccatcgccgcgagcagcgagctgggcctcgagggc
atcgtcgccaagaaacgcgatgggacctacgctgcgggacgacgctcccgcagctggatc
aaggtgaagaacagccgcacccaggaggtcgtcatcggcgggtggcgtgccggccggggg
cgccgggcgggcacggtcggctcgcttctgctcggggtgcccggcgacggcctcctccac
tacgtcgggcgtgtcggaagcggattcagcgaccgcgccctcgacaacctcgccgcccgc
ttccacgggctggaacgacaggagtccccattcgacgacgtgccgagagccgacgagtcc
gacgcgcactggctcgcccccacactcgtcggagaggtagagttcgccgagtggacgtcg
acaggacgccttcgtcatcccgcctggcgcggatggagaccagacaagaacgcggccgac
gtcgtgcgggaaaccacgtga

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