Misgurnus anguillicaudatus (oriental weatherfish): 129425743
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Entry
129425743 CDS
T09481
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like
KO
K12006
tripartite motif-containing protein 16
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129425743
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129425743
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
U-box
Prok-RING_4
DUF3037
Terminase_6N
P4Ha_N
DUF4407
DUF5446
Motif
Other DBs
NCBI-GeneID:
129425743
NCBI-ProteinID:
XP_055037850
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Position
20:15793932..15795639
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AA seq
367 aa
AA seq
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MAEASILWAQDQFTCSICLDLLKNPVTIPCGHSFCMDCITDCWDQDDQKRIYSCPQCRQT
FTPRPVLGKNVVIAEMLEKLKKKKLQSAPDSAHCYAGPGDVECDICTERKLKAVKSCLVC
LNSYCQNHFNQHENFFKDKNHNVIDATERLQEMICKKHNKQLEIYCRTDQQCVCYLCTMD
VHKNHDTVTAVAERTEKQMLLGETKRHLKQRITEREKKLQELRQTVVSYKRSAQTAVEDS
ERIFTELIRSIERRRSEVTQLIRDQEKTAVSRAEGVMKRLEEEIDDLKRRDAELKQFLQT
DNDIHFLQSFKSFSVTSGSSDVSSIIVSSLLTFDDLGKSVSKLREKLEDLCKDEIKCISD
RGKVTDM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagtattttatgggctcaggatcagtttacttgctcaatctgtctggat
ctactgaagaatccagtgaccattccctgtggacacagtttctgtatggactgtattaca
gactgctgggatcaagatgatcagaagcgaatctacagctgccctcaatgcagacaaacc
ttcacaccaagacctgttttaggtaagaatgtggtgattgctgaaatgctggagaaactg
aagaagaaaaaacttcaatctgctcctgactctgctcattgttacgctggacctggagat
gtggagtgtgacatctgtactgagagaaaactaaaagcagtcaagtcctgtctagtgtgt
ctgaactcttactgtcaaaatcacttcaaccagcatgagaatttctttaaagataaaaac
cacaacgtgatcgatgccactgaacgactacaagaaatgatctgcaaaaaacacaacaaa
caactagaaatctactgccgtactgaccaacaatgcgtttgttatctgtgtacgatggat
gttcacaaaaatcacgacactgtgacagctgtggcagagaggacagagaaacagatgctt
ttgggagaaacaaaaagacatttaaagcagagaattacggagagagagaagaagcttcag
gagctgagacagactgtggtctcttataagcgctctgcacagacagcagtggaggacagt
gagaggatctttactgaactgatccgatccattgagagaagacgatctgaggtgacacaa
ctgatcagagatcaggaaaagactgcagtgagtcgagctgaaggagtcatgaagcgtctg
gaggaggagattgatgatctgaagaggagagacgctgaactgaagcagtttttacaaaca
gacaatgacattcatttcctgcagagtttcaagtctttctctgtgacttctggatcttca
gatgtttccagcattattgtcagttctcttcttacttttgatgatttgggaaaatctgtt
tctaaactcagagaaaaactggaggatttgtgtaaagacgagattaaatgtatatctgac
agaggtaaagtaacagacatgtga
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