Misgurnus anguillicaudatus (oriental weatherfish): 129431054
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Entry
129431054 CDS
T09481
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03250
Viral life cycle - HIV-1
manu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129431054 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
129431054 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manu03400
]
129431054 (samhd1)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129431054 (samhd1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
129431054
NCBI-ProteinID:
XP_055044729
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Position
23:complement(6510273..6535205)
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AA seq
624 aa
AA seq
DB search
MNRPMKRPREDQDEESVWDVKRVHNEDFMRWGVDETIAFLQREGLEEWEQVFREHKISGH
GLLCITEVHLEKMGISPLGSRLKVLHCLQKLWQISNDDMKVFNDPIHGHIEMHPLLVRII
DTPQFQRLRHIKQLGGAYLVFPGASHNRFEHSIGVGYLAGCLVQALNERQPELLITRQDT
LCVQIAGLCHDLGHGPFSHMFDSMFIPKVQPGEKWKHEMASVQMFDHLVKVNDLEKVMEQ
HGLTLPDDLIFIKEQIAGPLDASILDTTQWPYKGRPKEKSFLYEVVANKRNGIDVDKWDY
FARDCYHLGIQNNFDYHRFLKFARVCEVRGKKHICTRDKEVGNLYDMFHTRNCLHRRAYQ
HRVGNIIETMITEAFVKADPHIKIQGSSGKIFTISSAINDMEAYTQLTDHIFEQILHSST
PELADARAILNNIVCRRLYKCVGQTTPETHVDVSQEKQLDWAKEVANCKPSGVDENLMPE
DFVVSVIQMDYGMKEKNPINNVHFYCKKDPSKAIKIRKNQVSKLLPERFAEQLIRVYFKK
TDDRSLEAARKCFVQWCMDKNFNKPQDGDIVAPELTPLKKNWQTNERDDEDSEIDDDDKD
EYTDITDKTPKKTGRNVKVSLFQA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaccgatgaaacgaccgagagaagatcaagatgaagagtctgtgtgggacgtg
aaacgggttcataatgaagattttatgcgctggggcgttgatgaaacaatcgcatttctc
cagagagagggactcgaagaatgggaacaagtcttcagagaacacaaaatatcaggacat
gggctactatgcattacggaggtacatttggaaaagatgggcatttcccctctgggttct
cgtctgaaagttctccactgtcttcagaagctctggcaaatctcaaatgatgacatgaag
gttttcaatgaccccatccatggccatattgaaatgcatcctttactagtccgcatcata
gacacgcctcaatttcagaggcttcgtcatatcaaacagctgggaggagcttacctagta
ttccctggggcttcacacaaccgctttgaacattcaattggagtgggatatttggcagga
tgtctagtacaggctcttaatgagagacaaccggagctactcatcacaaggcaagacact
ctttgtgtccagattgctgggctgtgccatgacttgggtcatggccctttctctcatatg
tttgatagcatgttcatccctaaagttcaacctggagagaaatggaagcatgagatggcc
tcagttcagatgtttgaccaccttgtgaaggtaaatgatcttgaaaaggtgatggaacag
cacgggttgactcttcccgatgaccttatattcattaaagaacagattgccgggcccctg
gatgcatctatcctagacactacgcaatggccatataagggcagaccgaaggagaaatca
ttcctgtatgaagtagtggctaataaaaggaatggcattgatgtagacaaatgggattat
tttgctcgagactgctatcatcttggtatacagaacaattttgactatcatcgtttcctc
aagtttgcccgagtgtgtgaagtaagaggaaaaaagcacatttgtaccagagacaaggaa
gttggtaatctctatgacatgtttcatacccggaactgccttcatcggcgggcgtatcag
catagagtgggcaacatcattgagacaatgatcacagaggcctttgtaaaggctgatcct
catatcaagatccagggctcctcaggcaagatatttacaatctcttcagctataaacgac
atggaggcctacacccaacttacagatcatatatttgagcagattctgcactcatccaca
ccggaactggctgatgcacgtgcaatcttaaacaacatcgtctgtagacgtttgtacaaa
tgtgtgggtcagaccacaccagagacacatgtggatgtgtcacaggaaaaacagcttgac
tgggcaaaagaagtggccaattgcaaacccagtggcgtagatgaaaacctaatgcctgag
gactttgtagtcagtgtcattcaaatggattatggaatgaaggagaaaaaccccatcaac
aacgtccacttctactgtaaaaaggatcccagtaaagccatcaagattcgcaaaaaccag
gtgtccaaactcctgccggagcggtttgctgagcagcttatcagggtgtactttaaaaag
actgatgacaggagcctggaagctgccagaaagtgttttgtccaatggtgcatggacaaa
aacttcaataaaccacaggatggagatatagttgctccagagctcaccccccttaaaaaa
aactggcaaaccaatgaaagagacgatgaagacagtgagatagatgatgatgataaagat
gagtacactgatattacagataaaacgcccaaaaagactggtcgtaacgtaaaagtgagc
ctttttcaagcttag
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