Misgurnus anguillicaudatus (oriental weatherfish): 129440072
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Entry
129440072 CDS
T09481
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03022
Basal transcription factors
manu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129440072 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
129440072 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manu03021
]
129440072 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
manu03400
]
129440072 (gtf2h2)
Transcription machinery [BR:
manu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129440072 (gtf2h2)
DNA repair and recombination proteins [BR:
manu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129440072 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
129440072
NCBI-ProteinID:
XP_055055109
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All DBs
Position
4:18267752..18278304
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AA seq
393 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEDILFQAKRKRVFESHGQVRLGMMRH
LYLVVDSSRSMEDQDLKPNRLTSTLKLMEYFVEEYFDQNPISQIGIITTKNKRAEKLTDL
AGNPKKHIAALKKAVDSTCIGEPSLYNSLNMAMQTLKHMPAHTSREILIIFSSLTTCDPA
NIYELIKTLKGLKIRVSVIGLSAEVRVCTILTRETGGTYNVILDESHFKELLMSHVKPPP
ASSSSECSLIRMGFPQHVIASMSDQDAKPSFSMSHLDSTSEGPGLTLGGYYCPQCRAKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLDAFQETPLEECEGERYCEACQVELKDKSIFT
CPGCRKVFCVECDLFIHDTLHCCPGCMLTDGMS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagcaaaacgctgggaaggaggttacgaacgaacatgggag
gttctgaaggaggatgagtctggatctctaaaagctacagtagaggacattcttttccag
gcaaagaggaaaagagtgtttgaaagtcatggacaagttcgacttgggatgatgcgccac
ctttatctggttgttgactcatctcgatcgatggaagatcaggacctgaagcccaacagg
ctgacctccaccctgaagctgatggagtattttgtggaggaatactttgaccagaatccg
atcagtcagatagggatcattactacaaagaacaagagggcggaaaagctgacagatctt
gcagggaatcctaaaaagcatatcgcagctcttaaaaaagctgtggactcaacatgcata
ggagagccgtccctctacaactctctcaacatggcaatgcagactctaaaacacatgcct
gcccataccagcagagagatactgatcatattcagcagtctgaccacatgtgacccagcc
aacatctatgagcttatcaaaaccctcaaaggtttgaaaatcagagtgtctgtgatcggc
ctgtcggcagaggttcgagtgtgcaccattctcacaagagaaacaggaggaacctacaat
gtgatattggatgagagtcattttaaggagctgctgatgtcgcatgtgaagccacctcct
gccagctcctcatctgagtgctcccttattcgcatgggtttcccccagcacgtcatagcc
tccatgtcagatcaggacgccaaaccttctttcagcatgtcgcaccttgacagcacttct
gaagggccaggactcactctcggtggatactactgtccacagtgcagagccaaatatact
gagctgccagtggagtgtaaagtgtgtggtctgactttggtttctgctcctcacttggcc
cgctccttccaccatctctttcctctggacgcctttcaggagaccccactggaggagtgt
gagggagagagatactgtgaagcttgccaagtagagttgaaagacaaaagtatatttact
tgtccgggatgtaggaaagtgttctgtgtagaatgtgatctcttcatacacgacacactg
cactgctgccccggctgcatgctaactgatgggatgtcctga
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