Misgurnus anguillicaudatus (oriental weatherfish): 129443093
Help
Entry
129443093 CDS
T09481
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
manu04121
]
129443093
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129443093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
U-box
Prok-RING_4
DUF4706
HTH_WhiA
GlutR_dimer
Motif
Other DBs
NCBI-GeneID:
129443093
NCBI-ProteinID:
XP_055059460
LinkDB
All DBs
Position
5:complement(46838581..46841790)
Genome browser
AA seq
547 aa
AA seq
DB search
MAESSFSVVQDQLICSICLDLLKDPVTIPCGHSYCMSCITDCWDQDDQKRDYSCPQCRQT
FNTRPDLNKNVVFAQMVEMLKKTKLQAARPDHSYAEAGDVKCDVCTERKHKAVKSCLVCL
NSYCQNHLEQHENLFKGKRHNLIDATGRLQQMICTQHEKLLEIYCKTDQLCICYLCMVDE
HNEHKTVSAAAERTEKQKELKETQRKYQQRIQESQKKLQELRDVVETHKRSAQTAVDDTE
RIFTQLITSIEKRRSEVTQLIRDQEKTAVSRAEGLLKRLEQEIDDLRRRDAELEQLSHTD
DHIHFLQSFQSLSVPPGSSDSLSITVSSLISFDDVRKSVSHLREKLEDFCREEIEKIFDK
VIPEPETREQFLKYYHHFTADPNTAYKHLCLSEGNRVITYTDTEQPYPDHSDRFDNCFQV
LCSESVSGRCYWEVEWSGVVFISVSYKSISRKGRDHECVFGFNDQSWSLWCYDSRYSFKH
NDIETKLPVVFRSSRIGVYVDHSAGSLSFYSVSDTMTLIHRVNTTFTKPLYPGFNVYESV
KLCDLTI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatccagtttttcagtggttcaggatcagttaatctgttcaatctgtctggat
ctactgaaggatccagtgaccattccctgtggacacagttactgtatgagctgtattaca
gactgctgggatcaagatgatcagaagagagactacagctgccctcaatgcagacagacc
ttcaatacaagacctgatttaaataaaaatgtggtgtttgctcagatggtggagatgctg
aagaagacaaaactacaagctgctcgtcctgatcacagttatgctgaagctggagatgtg
aagtgtgacgtctgtactgagagaaaacacaaagctgtcaagtcctgtctggtgtgtctg
aactcttactgtcaaaatcatcttgaacaacatgagaatttattcaaaggcaagagacac
aacctgatagacgccactggacgacttcagcagatgatctgcactcaacatgagaagctt
ttagagatttactgtaaaactgatcagctctgtatatgttatctgtgtatggtggatgaa
cacaatgaacataagactgtatcagctgcagcagagaggactgagaaacagaaagaactg
aaggagacacagagaaaataccagcagagaatccaggagagtcagaagaagcttcaggag
ctgagagatgttgtggagactcataagcgctctgcacagacagcagtggacgacactgag
aggatctttactcaactgatcacatccattgagaaaagacgatctgaggtgacacagctg
atcagagatcaggaaaagactgcagtgagtcgagctgaaggactcttgaagcgactggag
caggagattgatgatctgaggaggagagacgctgagctggagcagctttcacacacagat
gatcacatccatttcctccagagttttcagtctctctctgttcctcctggatcttcagac
tcactcagcatcactgtcagctctctcatctcttttgatgatgtaagaaaatctgtgtct
catctgagagagaaactggaggatttctgtagagaagagatagagaagatatttgataaa
gttattcctgaacctgagaccagggagcagttcctaaaatattatcatcacttcactgca
gatccaaacacagcatataaacatctctgtctgtctgaggggaacagagtgattacttac
actgacacagagcagccgtatcctgatcattcagacagatttgataattgttttcaggtg
ttgtgtagtgagagtgtgagtggacgctgttactgggaggttgaatggagtggtgtggtg
tttatatcagtgtcatataagagcatcagcaggaaggggcgggatcatgagtgtgtgttt
ggatttaatgatcagtcctggagtctgtggtgctatgactccagatattcattcaagcac
aatgacattgagactaaactcccagtagtgtttagatcttctagaataggagtttatgtg
gatcacagtgcaggatctctgtccttctacagcgtctctgacacaatgaccctcatccac
agagtcaacaccacattcactaaacctctctatcctgggtttaatgtttatgaatcagtg
aaactgtgtgatctaacaatatag
DBGET
integrated database retrieval system
