Misgurnus anguillicaudatus (oriental weatherfish): 129444299
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Entry
129444299 CDS
T09481
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129444299 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
manu03000
]
129444299 (kdm2aa)
04121 Ubiquitin system [BR:
manu04121
]
129444299 (kdm2aa)
03036 Chromosome and associated proteins [BR:
manu03036
]
129444299 (kdm2aa)
Enzymes [BR:
manu01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
129444299 (kdm2aa)
Transcription factors [BR:
manu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129444299 (kdm2aa)
Ubiquitin system [BR:
manu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
129444299 (kdm2aa)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
129444299 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
129444299 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
F-box
JHD
LRR_6
PHD
Cupin_8
LRR_4
Rubredoxin
Nop14
Motif
Other DBs
NCBI-GeneID:
129444299
NCBI-ProteinID:
XP_055060867
LinkDB
All DBs
Position
6:17253685..17280400
Genome browser
AA seq
1317 aa
AA seq
DB search
MENEQEILTIVDGGVLLMRRRGRKRKISDEDVTLKRAGTRRRYQDDAISDDEIDGKRTFD
LEEKLHSSRFSSDRVKRMEGKDFTYEYIQRGGLRDPIIFERPDGLGIKMPDPDFSVNDVK
TFVGSRRLIDVMDVATQKGTEMSMAQWCRYYETPASQRDKIYNVISLEFSHTKLESLVKR
PATVEMIDWVDNMWPRHLKERQRDSTNSIMEMQYPKVQKYCLMSVQGCFTDFHVDFGGTS
VWYHILNGSKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDRATDCQRIELKQGYTFIIP
SGWIHAVYTPVDTLVFGGNFLHSFNVPMQLNVASIEDRTRVPSKFRCPFFFEMAWYVLER
YLYSLTNTSYLIPEYQKYSLGIGIKQESSGCEVLNGHTKEERDESNTPPSGPGVKVHLTP
FELEGLWNLVGKLEALPAHKKYVPSGIHNAAALLHDIRALLKEHANDSPKLSYTGKPIVR
WPKRPSWYQPPPPPPPVIRPKLATTPIVPRPVKPSSNMSVLRRRRVRCKRCEACMRTECG
DCNFCRDMKKFGGPGKLKQTCVLRQCLAPGLPLSAVCEICGEGSLDVGEELMECSNCAQI
AHPSCLKVSGDGVINKDLPSCWECPKCVLGKDTESESSGSGDDITAQDGSGGLRGGAWHR
VGRPPSSLSHGSLQKQAAAPEQRLRKRINVEGAKAHKRKSSSLDPRVAKIYRRHGMEHDD
DSGSDDEDGDGGRKIHSRGGMSSSRRGYGTGRRGVWRGSTHRGNRGGGSLTNSLKMRRGL
GARGERGGRVRLRGGSHMRRRRYETEDEDDDDDDEDDDDDDEDEEDDDEDDSDEERHLGR
SDKQHRSRRRRHRGEDYDDDEEDDEDDDSDEQDFEGDDDEMEDMDDGGDDDDDDGENQSD
SDTDPPVLLVSDLNDDLLNDSYLTVTLQRPPKAKRDPGSIVPKLEAAMSPRTPNAPGFIQ
RKTLPRARLRNSNLTPTGNGLSQSKGANASSRHHTRRNSNQDGRERDTLSPSSVSSRSSV
SPPPPPPSITTSSPPSLLSHPSFRDVGNERGCEKDIWVSVFRYLSRTDLAVCMRVCKAWY
KWCCDKRLWTRIDLSRCRSLSPQAISAIIKRQPVTLDLSWTPVSKKQIAWLIHHLPGLKD
LVMSGCSSLCVSALSSQSCPGLRTLDLCWAVAVKDTQIKDLIVQPGSESRSRLRGLLNLR
LSGLDISDSTLKLIVRHMPSLRRLDLSHCQGLTDQSVNLITASGCNTRNTLRQLNLAGCN
KLTDACLSYMKRLSALRLLDLRGCKNVTRRGCENFISDLSYCTLFCLTEDKLIQKIS
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaacaggagatcttgactatcgttgacggtggcgtgttgttgatgagacgg
agagggaggaaaaggaagatcagtgatgaagatgtgacactgaagcgggctggcactcgg
cgacgttaccaggacgatgccatttccgacgatgagatcgatggaaagaggacgttcgat
ctggaggagaagctgcatagcagccgcttcagctcggacagagtcaaacgaatggagggc
aaagatttcacatatgagtacatccagagaggggggctaagggacccaatcatctttgag
agacccgatggacttggcattaaaatgccagatccagatttcagtgtgaatgatgtgaag
acgtttgtaggaagtcgacgcctgattgatgtaatggatgtggctactcagaagggaacg
gagatgtcaatggcccagtggtgtcggtactatgagactccggcttcccagagagacaag
atttacaatgttatcagtcttgaatttagccacactaaactagagagtcttgtcaaaaga
cctgcaacggtggaaatgattgactgggtggacaacatgtggccacggcatttaaaggaa
aggcaaagagattccacaaattctatcatggagatgcagtaccccaaagtgcaaaagtac
tgcctaatgagtgttcagggctgtttcacagatttccacgtagactttggaggcacatct
gtgtggtaccacatactgaacggaagcaaggtgttttggttaatcccacccacaccacaa
aacctggagctgtatgaaaactgggtgttgtcagggaaacaaggagacatctttcttggt
gacagggccactgactgccagaggattgagctcaagcagggatacacgttcattatacca
tcaggttggatccatgcggtttacacacccgtggacacacttgtgtttggtggaaatttc
ctgcatagttttaacgttcctatgcagctgaatgttgccagcattgaggacaggacacgg
gtgccatcgaagtttcgttgtcctttctttttcgagatggcctggtacgtgttggagcgt
tatctgtacagtctgaccaacacctcctacctcatccctgaataccagaaatactctctg
ggcatcggcattaagcaggaaagttcgggctgtgaggtacttaatggccatactaaagag
gagcgagatgagagcaacactcctcccagtggaccaggggtgaaggttcacctgactccc
ttcgaactggaggggctttggaacctggtgggaaagttggaggctttgcctgcacataag
aaatatgtgccttctggaatacacaacgccgccgccttgctgcacgacatacgggcgctt
ttaaaagaacatgcaaacgactcccccaaactctcatacactggaaaacctattgtcaga
tggccaaagagaccctcctggtatcagccccctcctccccctccacctgtcatccgtcca
aagctggcgaccacacccatcgttccccggccagtgaaaccatcctccaacatgtcggtg
ctgcggcggcgacgcgtgcgctgtaaacgctgcgaggcctgtatgcgcacagagtgtggc
gactgcaatttctgcagagacatgaagaagttcggtggccctggcaagctcaaacagacc
tgtgtcctccgccagtgtctcgctcctggtctgccgctctctgccgtatgtgagatctgt
ggggaaggaagccttgatgttggcgaggagctcatggagtgctccaactgtgctcagatt
gcccatcctagctgtttaaaggtatcgggagatggagtgatcaacaaagatctacccagc
tgctgggagtgtcccaaatgtgttttgggcaaagacacagaatctgagtcgtcaggcagc
ggtgatgacatcacggcacaggatgggtcaggggggctcaggggcggggcgtggcacagg
gtcgggcggcccccctcttcactctcccacgggtcgctccagaaacaggcagcggcccct
gagcagcggctcaggaagaggataaatgtagagggagcgaaagcacataaacgcaaatcc
tcatctctagatcctcgtgtggctaagatctaccggcgtcatggaatggaacacgatgac
gattctggcagcgacgatgaggatggagatggtgggaggaagatccactcaaggggtggc
atgtcttcgtcccgcagaggttacggaactggcaggcgaggagtttggaggggatccaca
catcgagggaatcgaggaggaggcagcttgacgaattcgctgaaaatgaggcgaggactt
ggggcaagaggagagagaggaggccgggttcgattaagaggaggatctcatatgaggcgg
cgacgctatgaaaccgaggacgaagatgacgacgatgatgatgaagatgatgatgatgac
gacgaagatgaggaagatgatgatgaggatgatagtgatgaagagaggcatctgggtcga
tcagataagcaacatcgttcacggaggagacggcatagaggtgaggactacgatgatgat
gaggaggacgacgaagatgacgatagcgatgaacaggactttgaaggagatgatgatgag
atggaagatatggatgatggaggggatgacgatgatgatgatggagagaaccagtcagat
tcagacactgatccacctgtcctactcgtctccgatttgaatgatgacctgctgaacgat
tcctacctaactgtgactcttcagcgtcctcccaaagccaaacgtgaccctggctccata
gtacctaaactggaggctgctatgtctccccgcacacccaacgctcctggtttcatccag
cgcaaaacattgcccagggcgcgactcaggaacagcaatctgacaccgactggtaatgga
ctttctcagtctaaaggtgccaatgcatccagccgccaccacacaaggcggaactccaac
caagacggtcgagagagagacactttgtcaccttcctcagtgtcttctcgttcttccgtt
tctccaccacctccgcctccttccatcaccaccagctctcctccatcactcctctctcat
ccctcattccgtgatgtaggaaacgagcgaggctgtgaaaaggacatttgggtgtctgtg
ttccgttacttgagtcggactgacttggctgtgtgtatgagagtctgcaaggcttggtac
aaatggtgctgtgataagcgcttgtggacacggatagatctgagccgctgtcggtcacta
agcccccaggctatttcagccatcattaaacgacaacctgtgacactggacctctcttgg
acacccgtgtcaaagaaacaaatcgcctggctcatccatcacctaccaggtctgaaagat
ctagtgatgtcaggttgttcttcattatgcgtgtcagctttgagttcacaaagttgcccg
ggtttgcgaacactagacctttgttgggctgtcgccgtcaaagatacacaaataaaagac
ctaatagtgcagccaggcagtgaaagtcgcagtcggctaagaggtttgctaaatttacgt
ttgtctggcttggatataagtgactccacgctgaagctgattgtcagacacatgccttcg
ctgaggcggttggatttgtctcactgccaggggctcacagatcagtccgtcaacctgatc
accgcttctgggtgcaacacccgaaacacgctcagacaacttaatcttgcaggttgtaat
aagttgacagatgcttgtctgtcctatatgaagcgattatcagctctcagattgttggat
cttcgaggatgtaagaatgtgactcgacgtggttgtgaaaactttatctctgatctctct
tactgcaccctcttctgcctaaccgaagacaaactcattcagaaaatatcataa
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