Misgurnus anguillicaudatus (oriental weatherfish): 129450194
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Entry
129450194 CDS
T09481
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
manu03041
]
129450194 (ddx27)
03009 Ribosome biogenesis [BR:
manu03009
]
129450194 (ddx27)
Enzymes [BR:
manu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129450194 (ddx27)
Spliceosome [BR:
manu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129450194 (ddx27)
Ribosome biogenesis [BR:
manu03009
]
Eukaryotic type
Pre-60S particles
Helicases
129450194 (ddx27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
PRK
Motif
Other DBs
NCBI-GeneID:
129450194
NCBI-ProteinID:
XP_055068725
LinkDB
All DBs
Position
9:803814..811277
Genome browser
AA seq
765 aa
AA seq
DB search
MFSDDLIRTIDDNDDVPEESDSASDNEADEPIVLSKEKRALKGRATGDFSVDFEFGERDG
LYSDDWAMADVRAQLKKRKAPTTLDEKIEKVRKKRKIEEKNQKDNKKTEAVASKEGDDEE
GEEDDDDEEEENNDIDEDEDDVEEDEFSSGDEEVLKKADTLREKQKKGKRKDAETAEAFF
EDASHYDENLTFQDMNLSRPLLKAITTMGFKQPTPIQKACVPVGLMGKDICACAATGTGK
TAAFMLPVLERLIYKPRETQVTRVLVLVPTRELGIQVHTVARQLAQFTNISTCLAVGGLD
LKSQEAALRAGPDVLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYFEEQMKEI
IRMCSYQRQTMLFSATMSEEVKDLASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPAREG
DREAIVAALLTRTFQDHVMVFTQTKKQAHRMHILLGLMGLKVGELHGDLSQTQRLESLRR
FKDEQIDILVATDVAARGLDIDGVKTVINFTMPNTVKHYVHRVGRTARAGNVGRSVSLVG
ETERKMLKEIVKKAKTPVKARVLPQEVILKFRDLIEKLEKDVYAVLRLEKEEKEMTRSEA
QISSAQRKLTQTPDEKQAPRTWFQTHEERKKDRMSKALQDFDLALRGKKKRAQFLKENKK
KVLTGEERAQFEILKSQMYAERAAKRDRKPKRARAVPEAEPVKKDVKQNNSKSGKKSVFD
KELTNTSKKALKQYRAGPSFEDRKRLGISNKKGGRFKSKSKFRRK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgttttcggatgatctgatcagaactattgatgataatgatgacgtcccagaggagtcc
gactcagcgtctgataatgaagctgatgagccgatagtgttgagtaaagaaaagcgagca
ctgaagggtcgagcgacaggagatttcagtgttgactttgagtttggagagagagatgga
ctttacagtgatgactgggctatggcagatgttagggctcagctcaagaagaggaaagca
cccactacgctggacgaaaagatagagaaagtgcggaaaaaacgcaaaattgaggagaaa
aatcagaaagacaacaagaaaacagaagctgtagcttctaaagagggagatgatgaagag
ggagaggaagacgatgacgatgaagaagaagaaaataatgacattgatgaagatgaggat
gatgttgaggaagatgagttctcatcaggtgatgaagaggtccttaaaaaagcagacact
ttgagagaaaaacagaagaaaggcaaaaggaaagatgcagaaacagctgaagcgttcttt
gaagatgcatctcattatgatgagaatctcacttttcaggacatgaatctctccagacct
ttactgaaggccatcacaacgatgggatttaaacagcccacacctatccagaaggcatgt
gttcctgttggactgatgggaaaagacatctgtgcgtgtgcggccacaggcaccggtaaa
acggcagcgtttatgttgccagtacttgagcgtctgatctacaagccgagagagactcag
gtgacccgtgtgctggttttagtgccaaccagagagctgggcatccaggtgcacacagtg
gcccgtcagctggcacagttcaccaacatcagcacatgtctggctgttggtgggttggac
ttgaagtctcaggaggcggcgctgagggcggggcctgacgttctgatcgccacgcccgga
cgattgattgaccatcttcacaacacgccgtccttcgagctgagccagattgaaatcctc
atcctggacgaggctgataggatgctggacgagtactttgaagagcagatgaaggagatc
attaggatgtgttcataccagaggcagactatgcttttttcagccaccatgagtgaagag
gtgaaagatttggcctcggtgtcgttgaaacagcccgtaaggatcttcgtgaacagtaac
acagacgtggcgccgtacctcagacaggagtttgtcaggatcagaccggcgagagaagga
gatagagaggccattgtagcagctctcctaaccagaacgtttcaggaccatgtgatggtc
ttcactcagactaagaaacaagctcatcgtatgcacattctgttgggtctgatggggtta
aaggtcggagagcttcatggagatttgtcacagacacagagattggagagtctgaggcgg
tttaaagatgaacagattgatattttggtggccacagacgttgccgctcgaggtctggat
atagatggtgtaaaaactgtaataaatttcaccatgcccaacactgtgaaacattacgtg
cacagggtgggccgaacggctcgcgcgggcaatgtgggccgctcggtgtcactggtaggt
gagacggagcgaaagatgcttaaagagattgtgaagaaagccaaaactcctgttaaagct
cgagtgcttcctcaagaggtaattttaaagttccgtgatctgattgagaagctggagaag
gacgtgtacgcagttttgcggttagagaaggaagagaaagaaatgacacgatcagaagca
cagatcagctccgctcagaggaaattaacccagacgccagatgagaaacaagctcccagg
acgtggtttcaaacgcatgaggagagaaagaaagatcgaatgtcaaaagctctgcaggac
tttgatctagcattgagaggaaagaagaaacgggctcagtttcttaaagagaacaagaag
aaagtgctgacgggagaagaacgagctcagtttgagatcttgaaatcacagatgtatgcc
gaacgtgcagctaaacgtgaccgcaaaccgaagcgagcgagagccgttcctgaagctgaa
ccggttaagaaagatgtgaaacaaaacaacagcaaatctgggaagaagtctgtgtttgac
aaagagctcacaaacacaagcaagaaggcactgaagcagtacagagccggaccttcattt
gaggacagaaagagactcggcatttcaaacaagaagggaggacgcttcaaatccaaatcc
aagttcagaagaaagtga
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