Misgurnus anguillicaudatus (oriental weatherfish): 129455617
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Entry
129455617 CDS
T09481
Symbol
hdac1
Name
(RefSeq) histone deacetylase 1 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
manu
Misgurnus anguillicaudatus (oriental weatherfish)
Pathway
manu03082
ATP-dependent chromatin remodeling
manu03083
Polycomb repressive complex
manu04110
Cell cycle
manu04330
Notch signaling pathway
manu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
manu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129455617 (hdac1)
03083 Polycomb repressive complex
129455617 (hdac1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129455617 (hdac1)
04350 TGF-beta signaling pathway
129455617 (hdac1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129455617 (hdac1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
manu03036
]
129455617 (hdac1)
Enzymes [BR:
manu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129455617 (hdac1)
Chromosome and associated proteins [BR:
manu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
129455617 (hdac1)
HDAC complexes
Sin3A-HDAC complex
129455617 (hdac1)
BRAF-HDAC complex
129455617 (hdac1)
REST complex
129455617 (hdac1)
SHIP complex
129455617 (hdac1)
MiDAC complex
129455617 (hdac1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
129455617 (hdac1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
129455617 (hdac1)
Chromatin remodeling factors
NuRD complex
129455617 (hdac1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
129455617
NCBI-ProteinID:
XP_055076361
LinkDB
All DBs
Position
12:complement(11277788..11285943)
Genome browser
AA seq
484 aa
AA seq
DB search
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTFETAVALDSTIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEDDPDKRISIRAHDKRIACDEEF
SDSEDEGQGGRRNTANYKKPKRVKTEEEKDGEEKKGEPTDVKEEEKAPEEKMDTKGPKEE
LKAV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacttctcaaggaacaaagaagaaagtttgctactattacgatggtgatgtg
gggaattactactacggtcagggtcatcccatgaaaccccacagaattcgcatgacccac
aaccttctcctgaattatggcctctatagaaagatggaaatttataggcctcacaaggcc
aatgctgaagagatgaccaagtatcacagtgatgactacatcaagttcctgcgctccatc
cggccagacaacatgtctgagtacagcaagcagatgcagagatttaatgttggggaggat
tgtcctgtctttgatggcttatttgaattctgtcagctctcgacaggtggctctgttgcc
ggggctgtgaaactcaacaaacagcagacagacatcgccattaactgggcaggagggctt
catcacgccaagaagtctgaggcatctgggttctgttatgtcaacgatattgtgttggct
attctggaactgctcaagtaccatcaaagagtgctttacattgatattgacattcatcat
ggagatggagttgaggaagctttctacacaacagaccgtgtcatgactgtgtccttccac
aagtatggagagtattttcctggtacaggagatctaagagatatcggtgcaggaaaggga
aaatactacgctgtgaactacccactcagggatggaatagacgatgaatcctatgaagcc
atattcaaacctatcatggccaaagtgatggaaatgtatcagcccagtgctgtggtgctt
cagtgtggtgctgattctctgtctggagacagactgggatgcttcaacctcaccatcaaa
ggtcatgccaagtgtgtggagtacatgaagagctttaatctgccactgctcatgctgggc
ggtggaggttacaccatcaggaacgtggcccgctgctggacctttgagaccgctgttgca
ctggactccaccattcctaatgagctcccatacaacgattactttgagtatttcggacct
gatttcaagctccacatcagtccctccaacatgaccaatcagaacacaaacgactatctg
gagaaaatcaaacagcgtctgtttgaaaatttgagaatgctgcctcacgccccaggtgtt
cagatgcaggcgatcccagaggatgctgttcaggaagacagcggagatgaggaggatgat
cctgataagcgcatatctattcgtgcccatgacaagcggatagcatgcgatgaggagttc
tccgactctgaggatgaaggtcagggtggccggagaaatacagccaattacaagaagccc
aaacgggtgaagaccgaagaggagaaggatggagaggagaagaaaggtgagccaacagat
gttaaagaagaggaaaaagctccagaggaaaaaatggacacaaaggggccaaaagaagaa
ttaaaagcggtctga
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