Mycolicibacterium anyangense: MANY_29550
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Entry
MANY_29550 CDS
T07096
Symbol
ligD
Name
(GenBank) multifunctional non-homologous end joining protein LigD
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
many
Mycolicibacterium anyangense
Pathway
many03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
many00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MANY_29550 (ligD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
many03400
]
MANY_29550 (ligD)
Enzymes [BR:
many01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MANY_29550 (ligD)
DNA repair and recombination proteins [BR:
many03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MANY_29550 (ligD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
BBZ77618
UniProt:
A0A6N4WAS6
LinkDB
All DBs
Position
complement(3135251..3137518)
Genome browser
AA seq
755 aa
AA seq
DB search
MVNQVWPPGATKGPRVALSNADKVLYPATGTTKADVFGYYTAIAEVMVPHIAGRPVTRKR
WPNGVDEPAFFEKQLASSAPDWLERASVVHRSGATTYPIIDTSTGLAWIAQQASLEVHVP
QWRFTSAGKPGPATRLVFDLDPGEGVEMPQLCEVANGVRELMDDIGLTVYPLTSGSKGLH
LYAPLAEPVSSSGAAVLARRVAQQLEQSMPALVTATMTRSLRAGKVFLDWSQNNAAKTTI
APYSLRGRSHPTVAAPRTWDEIGDPALRQLEYTEVLARVAEHGDLLADLDADVPREDRLS
TYRSMRDSAKTPEPVPAAAPALGNNDRFVIQEHHARRLHYDFRLERDGVLVSWAIPKNLP
DTPAVNHLAVHTEDHPLEYATFEGAIPKGEYGGGQVIIWDSGTYEAEKFRDNEVIVDLYG
QRITGRYALIQTKGDQWLAHRMKEQPVPSLRDYSPMLATLGSVEKLTAGQYAFEGKFDGY
RLLVEANHGRIRLQSRSGRDVTGEYPQLASLAADLADHDVILDGEVVALDADGVPSFGEM
QNRVRATRIEFWAFDILALDGRSLLRAKYRDRRAILETFAQGTDLIVPALLDGDGPAALE
YSRTRKWEGVVAKKWDSTYQPGRRSSAWIKDKNWNTQEIVIGGWREGNGGRSSGIGALLM
GIPGADALQFVGRVGTGFSDKELGKLKKILEPLHTDRSPFDPPLPRAETKGVTYVRPELV
GEVRYGEWTSDGRLRHPSWRGLRSDKDPADVRRES
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaatcaggtgtggccgcccggggcgacgaagggcccgcgcgtcgcgctgagcaac
gccgacaaggtgctctatccggccaccggcaccaccaaggccgatgtgttcggctactac
accgccatcgccgaggtgatggtgccgcatatcgccgggcgcccggtgacccgcaagcgc
tggcccaacggtgtggacgagccggcgttcttcgaaaagcagctcgccagttcggccccg
gactggctcgagcgtgcgtccgtggtgcaccgctcgggcgccaccacctacccgatcatc
gacacctcgaccggtctggcgtggatcgcccagcaggcttcgctggaggtccatgtgccg
cagtggcgtttcacctcggccggaaagcccgggcccgcaacgcgtttggtgttcgacctg
gatcccggcgagggtgtggagatgccgcagctgtgtgaggtggccaacggcgtgcgggaa
ttgatggacgacatcgggctgacggtctatccgttgaccagcggcagcaagggcctgcac
ctctatgcgccgctggccgagccggtcagcagcagtggtgcggccgtgctggcccgccgg
gtggcccagcagctcgagcagagcatgcccgcactggtcaccgccacgatgaccaggagc
ctgcgggcgggcaaggtgttcctggactggagccagaacaacgccgccaagaccaccatc
gcgccgtactcgctgcgcggccgctcccatcccaccgtcgccgcaccgcgcacctgggac
gagatcggcgatcccgcgctgcgccagctggagtacaccgaggtgctggcgcgggtggcc
gagcacggcgatctgctcgctgacctcgacgccgacgtgccgcgggaggaccggctgtcc
acttaccgcagcatgcgcgattcggccaagacaccggagccggtgcctgccgctgccccg
gccctcggcaacaatgaccgcttcgtcatccaggagcaccacgcccgccggttgcactac
gacttccggctggaacgcgacggggtgctggtgtcctgggcgatcccgaagaacctgccc
gacactccggccgtcaaccacctggccgtgcacaccgaggaccatccgctggagtatgcg
acgttcgagggcgcgatcccgaagggcgagtacggcggcggccaggtgatcatctgggac
tccggcacctacgaggccgagaagttccgggacaacgaggtgatcgtcgacctctacggt
cagcggatcaccgggcgctatgcgctgattcagaccaagggcgaccagtggctggcacac
cggatgaaggaacaaccggtgccctctctgcgggactattcacccatgctggccaccctg
ggctcggtcgagaagctgaccgcgggccagtacgcgttcgaaggcaagttcgacggctac
cggctgctggtcgaggccaaccatggccggatccgcctgcagtcgcgcagtggacgcgac
gtcaccggtgagtatccccaattggcctcgctggcagcagatctcgctgaccacgacgtg
atcctcgacggtgaggtcgtggcgctggatgccgacggtgtgccgagtttcggggagatg
cagaaccgggtgcgagccacccgtatcgagttctgggccttcgacatcttggcgctcgac
gggcggtcgctgctgcgtgccaagtaccgcgaccggcgcgcgatccttgaaacctttgcg
cagggaaccgatctcatcgtccccgcgctgctcgacggcgacggaccggctgccctcgag
tattcgcgcaccagaaagtgggagggggtggtcgccaagaagtgggactccacctaccag
ccggggcggcggtcctcggcctggatcaaggacaagaactggaacacccaggagatcgtg
atcggcgggtggcgggaagggaacggcggacgctccagcggcatcggggcactgctgatg
ggcataccgggcgccgatgccctgcagttcgtcggccgggtcggcaccggcttctcggac
aaggaactcggcaagctcaagaagattctcgaaccgttgcacaccgaccgctcgccgttc
gacccgccgttgccgcgggccgagaccaagggcgtcacctacgttcggcccgaactcgtc
ggcgaggtccgctacggcgagtggacctccgatggccgactgcgccatcccagctggcgc
ggcctgcgctcggacaaggaccccgccgacgtgaggcgggaatcctga
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