Methanofollis aquaemaris: RJ40_05920
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Entry
RJ40_05920 CDS
T08618
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
maqe
Methanofollis aquaemaris
Brite
KEGG Orthology (KO) [BR:
maqe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
maqe03016
]
RJ40_05920 (endA)
Enzymes [BR:
maqe01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
RJ40_05920 (endA)
Transfer RNA biogenesis [BR:
maqe03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
RJ40_05920 (endA)
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
CcmD_alt
Motif
Other DBs
NCBI-ProteinID:
QSZ67064
UniProt:
A0A8A3S610
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All DBs
Position
complement(1251384..1252397)
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AA seq
337 aa
AA seq
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MKATFDGTWLWLGQDGLALYESGGYGRPDKGKLRLAPEEGLYLLARKRIELPGYDFEKLL
QELSKDPVFFRRYLVYRDLRERGYALQTGPHDFRVFRRGERPGKGQSHHLVRVLAERDLV
DFAQVAAEVETAGNMRKIYLVAAVDDEGELTYYEVKVDHLAGPEGEAPAGKGTAGGEAFG
PVAVVRTGKAPWLPEEGYGKPFDQEQTMLSPPEVLYLMDEGRLTLTENGTPLTREVYHAL
AAAADSEIAEKAVLYTDLRRRGYAPKTGYKFGHHFRVYGGGVKHSLMLVHALPAGTTLTM
AAISRSVRLAHSVKKKMLFGCVHNNDIQYIEFARIKM
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgacatttgacggcacctggctctggctcgggcaggacgggcttgctctctac
gagagcggtggctacggccggcccgacaaggggaaactccgcctcgcccctgaggaggga
ctctacctcctggcgcgcaagcggatcgaactgcccggctacgacttcgagaaacttctg
caggaactttcaaaggacccggtcttcttcaggcggtacctcgtctaccgcgaccttcgg
gaacggggctatgccctgcagaccggcccgcatgacttccgggtcttccggcggggcgaa
cgtccgggcaagggacagtctcatcacctggtgcgggtgcttgccgagcgcgacctcgtc
gacttcgcccaggtcgccgccgaggtggagaccgccgggaatatgcgaaagatctacctg
gtcgccgccgtcgacgacgagggcgaactcacctactatgaggtgaaggtcgaccacctc
gccgggcccgagggggaggccccggccggtaagggtacggcaggcggcgaggctttcggc
ccggtcgctgtggtcaggaccggcaaggcaccctggcttcctgaggaggggtacggcaag
cccttcgaccaggagcagacgatgctctccccgcctgaggtgctgtatctcatggacgag
ggaaggctcacgctcaccgaaaacggcaccccactcactcgcgaggtctaccatgccctc
gccgccgccgcagacagtgagatcgccgaaaaagccgtcctctacaccgaccttcgccgg
cgcggctacgcccccaagaccgggtacaagttcggtcaccacttcagggtctacggcggc
ggggtcaagcactccctcatgctcgtccacgccctgccggccgggacgaccctcaccatg
gcggcgatctctcgttcggtccgtctggcacacagtgtcaaaaagaagatgttgtttggt
tgtgtacataacaacgatatccagtatatcgagtttgcacgaataaaaatgtga
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