Marinomonas arctica: IBG28_16395
Help
Entry
IBG28_16395 CDS
T06902
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mard
Marinomonas arctica
Pathway
mard00521
Streptomycin biosynthesis
mard00523
Polyketide sugar unit biosynthesis
mard00541
O-Antigen nucleotide sugar biosynthesis
mard01100
Metabolic pathways
mard01110
Biosynthesis of secondary metabolites
mard01250
Biosynthesis of nucleotide sugars
Module
mard_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mard00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
IBG28_16395 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IBG28_16395 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IBG28_16395 (rfbC)
Enzymes [BR:
mard01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
IBG28_16395 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
YlxR
Motif
Other DBs
NCBI-ProteinID:
QNT08180
UniProt:
A0A7H1JCG4
LinkDB
All DBs
Position
complement(3548896..3549432)
Genome browser
AA seq
178 aa
AA seq
DB search
MDVIKTAIDGVVIIEPKVFGDERGFFLETFQAERYKELAGIDLPFVQDNHSRSGKNVLRG
LHFQKTKPQGKLVRVVRGEVFDVVVDIRKSSPTYGLWAGVLLSEENKRQFWVPPGLAHGF
VVLSEVADFEYKCTDYYDPSDEGCLIWNDPTVDIEWPEGIEPILSAKDQLGHALGELL
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggatgttattaaaaccgctatcgatggggtggtcattatagagcctaaagtgtttggt
gatgagcgaggcttttttttggaaacgtttcaggcggaacgctataaagaattggctggt
attgatttgccctttgttcaagataatcactctcgctcaggaaaaaatgtcttgcgtggt
ttgcattttcaaaagaccaaacctcagggtaagttagtacgagtggtgcgcggtgaagtg
tttgatgtggtagtagatatacgaaaaagttctcctacttatggtttgtgggctggggtt
ttattatcagaagaaaacaaacgtcagttttgggtgccacccggtttggctcatggtttt
gtggtgttgtcggaggtggcggatttcgaatacaagtgcacggattattatgatccgagt
gacgaaggttgtttgatatggaatgatccaaccgtcgacatagaatggccagaaggtatt
gagccgattttatcggcaaaagaccaactgggtcatgcattgggtgagttgttgtaa
DBGET
integrated database retrieval system
