KEGG   Methanobrevibacter arboriphilus: MarbSA_09590
Entry
MarbSA_09590      CDS       T07510                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
maro  Methanobrevibacter arboriphilus
Pathway
maro03030  DNA replication
maro03410  Base excision repair
maro03420  Nucleotide excision repair
maro03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:maro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MarbSA_09590
   03410 Base excision repair
    MarbSA_09590
   03420 Nucleotide excision repair
    MarbSA_09590
   03430 Mismatch repair
    MarbSA_09590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:maro03032]
    MarbSA_09590
   03400 DNA repair and recombination proteins [BR:maro03400]
    MarbSA_09590
Enzymes [BR:maro01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MarbSA_09590
    6.5.1.6  DNA ligase (ATP or NAD+)
     MarbSA_09590
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MarbSA_09590
DNA replication proteins [BR:maro03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MarbSA_09590
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MarbSA_09590
DNA repair and recombination proteins [BR:maro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MarbSA_09590
   NER (nucleotide excision repair)
    Other NER factors
     MarbSA_09590
   MMR (mismatch excision repair)
    Other MMR factors
     MarbSA_09590
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DUF596
Other DBs
NCBI-ProteinID: BBL61919
LinkDB
Position
1071513..1073165
AA seq 550 aa
MKYKKLVDVYESLAATTKRLEKTSILSEFFKEVDIETLPKVVLMALGTVFPPWCEEEQGL
ADKLLMKSIANVVGVSINKVEDQVREQGDIGGAAEELYKNKSQTTFFFKPLEIDFVFNNL
RKLAKISGDRSTSRKIAIVLELLSSATATEAKYISRTIIEELRIGVGEGTIRDAISQAFE
VEKSVADRAHMLTNDLGLVAKVAKEEGENGLKKLNLSPGKPVKPMLAQLSEGIAISVEEM
GEAICETKYDGIRVQIHKKNDKINLFTRRLENISKAIPEMVDYIRESFPNQDFIAEGEII
ATKNNNPISFQYMLQRVRRKYNIEKAIEDVPLKLYLFDLLYFKEPMIDKPLEIRRATLES
IVKTEKNQINLSKMIKVTSENISDAQILFNESISKGHEGIMIKNPKEPYIPGIRGKKMLK
FKAEPETLDVVVVGGTYGVGKRASFIGSYKVALADENGDLKTLAHVATGLDDETLAELTN
LMKKYKIVEKGTKIDVEPRIILEIAYSEIVKSPEYEAGYSLRFPVVKRIREDKGLSDIDT
VERLKSMFKG
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaagtataaaaaactagttgatgtatatgaatcattggctgcaacaacaaagcgtttg
gaaaaaacaagcatattatctgaattttttaaagaagtagatattgaaacacttccaaag
gttgttcttatggccctaggtacagttttccccccatggtgtgaagaagaacaaggctta
gctgataaattacttatgaaatcaatagccaatgttgtgggtgtttcaataaataaagta
gaggatcaagtcagagaacaaggtgatattggaggagctgctgaagaattatataaaaat
aaatctcaaacaactttcttttttaaacctctcgagatagattttgtatttaataatctt
agaaaattagctaaaatctctggtgataggtcaacatcaagaaaaatagctattgtttta
gaacttttatcatctgccacagcaactgaagcaaaatatatatctagaactataattgaa
gagcttagaataggggttggagaaggaacaatacgtgacgcaatttcacaagcatttgaa
gtagaaaaatcagttgcagatcgtgcacatatgcttacaaatgatttaggattagtagct
aaagtagctaaagaagaaggagaaaatggactcaaaaaattgaatttaagtcctggtaag
ccggtgaaacctatgttagctcagctttcagagggaatagctattagtgttgaagaaatg
ggagaagctatctgtgaaacaaaatatgatggaataagagttcagatacataaaaaaaat
gacaaaataaatctatttacccgtcgacttgaaaatattagtaaagcaattcctgaaatg
gtagattatatcagagaatcatttcccaaccaagattttatagccgagggtgaaataatt
gctacaaaaaataataatcctatatcttttcagtatatgctgcaaagagtaagaagaaaa
tacaatattgaaaaagcaattgaagatgtaccactcaaattatatctttttgaccttctc
tattttaaagagccaatgatagataaaccattagaaataagacgtgcaacacttgaatct
attgttaaaactgaaaagaatcaaataaatcttagtaagatgattaaagtcacatctgaa
aatatttcagatgctcaaatactctttaatgaatccatatcgaaaggacatgaaggaatt
atgataaaaaatccaaaagaaccatatattcctggaatacgtggaaaaaaaatgctaaaa
tttaaggctgaaccagaaacattagatgtagtagtggtaggtgggacttatggtgttgga
aaaagagcaagctttattggatcatataaagtagctttagctgatgaaaatggtgattta
aaaacattagcacatgtagctactggtttagatgatgaaacattagcagaactaactaat
ctcatgaaaaaatacaagattgtagaaaaaggtacaaagatagatgttgagccaagaata
attctagaaattgcatatagtgaaatcgttaaaagtcctgaatatgaagcaggatactct
ttgcgatttccagtagtaaaaaggattagggaagataaaggactatcagatattgataca
gtggaacgtttaaaatctatgtttaaaggatag

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