Maribacter hydrothermalis: BTR34_09995
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Entry
BTR34_09995 CDS
T04597
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mart
Maribacter hydrothermalis
Pathway
mart03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mart00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTR34_09995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mart03019
]
BTR34_09995
03400 DNA repair and recombination proteins [BR:
mart03400
]
BTR34_09995
Enzymes [BR:
mart01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTR34_09995
Messenger RNA biogenesis [BR:
mart03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTR34_09995
DNA repair and recombination proteins [BR:
mart03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BTR34_09995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HTH_40
RQC
RecQ_Zn_bind
HRDC
ResIII
IF2_N
Helicase_Sgs1
GerE
HTH_23
HTH_7
HEM4
Motif
Other DBs
NCBI-ProteinID:
APQ17641
UniProt:
A0A1B7ZEY1
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All DBs
Position
2327755..2329839
Genome browser
AA seq
694 aa
AA seq
DB search
MIAIEKDLLPLLKKNFGYDSFKPNQLSIIDDALNNKDVIAIMPTGGGKSLCYQLTALALE
GTAIVISPLIALMKDQVDVLQANGIAADYYNSSQSQETQQEILGKLERGELKLFYVAPES
LGFFDTILGNLKISLFAIDEAHCISSWGHDFRPAYTQLGGLKRRFPNIPVMALTATADKT
TQDDIADQLQIQNAERHLASFNRPNLYLDVKPAQDRIKHILDFLDERPFESGIIYCLSRK
STESIAEKLRNAGFKAKAYHAGLSSEERSTVQEEFITDKVPIIVATIAFGMGIDKSNVRW
VIHYNLPKNIEGYYQEIGRGGRDGLPAHALLFYSFADVAQLRRFITQSENAEVEYAKLER
MQQFAEALSCRRIALLNYFGEQVTKGCGNCDICTTPPAYFDATLLAQKVCSGVARLKERE
PMGMLIDVLRGAQNAHVLEKGYQNIKTYGAVKDVSWLDLQQYVIQLLNQGVLDINFREGA
RLGLTTLAKEVLFSGKKIQLAVLQKETEKRKAAPKSSIKKTDLFEKLRVLRQQIAIEQNV
PAYVVFGDASLKDMEVKLPKNEKEFMDVSGVGQAKLEKYAVVFLEEIKKHVGTKKSKRKT
HDQTFDLFSEGLTVSEIATARNLSENTIYGHLMKKHTEGEELDLNQFVSIEDISKIENAK
SQLTDVTGLKDYFEFFEEKMPYWKIKLALYMLDS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaatagaaaaagacctactcccattattaaaaaaaaactttggttacgattcg
tttaagcctaatcaattatccatcattgacgatgcgcttaataataaagatgttatagca
attatgcctaccggtggtggtaaatcactctgttatcaactaacggctttagcacttgaa
ggtacagcaattgtgatttctccgctaattgccttaatgaaggaccaggttgatgtgtta
caggcaaacggcattgcagcggattattataatagttctcaatcacaagaaacacaacag
gagattttagggaagttggaacggggcgagttgaaactattttatgttgccccagagagt
cttggtttttttgatactattcttggaaatttaaagattagtcttttcgcgattgatgaa
gcacattgcatttcatcttggggacacgattttagacctgcctatactcagttaggcgga
ttaaaaagaagatttccgaatattccggtgatggcgcttacggcaaccgctgacaaaact
actcaggatgatattgcggaccaattgcaaatacagaatgctgaacgtcatttagcctct
tttaatagacctaatttatatcttgatgtaaaacccgctcaagaccgaataaaacatatt
ctggattttttagatgaacggccttttgaaagtggaataatttactgcctaagtcgaaaa
agcactgagtccattgccgagaaattacgaaatgctggctttaaagcaaaagcctatcat
gcaggtttatcgtctgaagagcgctctacggttcaagaagaatttattactgataaggtt
cctattattgtggcaaccattgcctttggcatgggtatagataaaagtaacgttcgttgg
gttattcattataacctgcccaaaaatattgaaggatactaccaagaaattggtcgtggt
ggtcgtgacggcttgccagcgcatgccttgttattttatagttttgccgatgtcgctcag
ttacgaagattcattacccaaagcgaaaatgcagaagtagaatatgccaaattagaacga
atgcagcaatttgctgaagcgttaagttgtcgtagaattgcgttattgaactattttgga
gaacaagtaaccaaaggttgtggtaattgtgatatctgtactactccacctgcttatttt
gatgccactttattagcccagaaagtttgttccggggttgcccgtttaaaagagcgcgag
ccaatgggtatgttgatagacgtcttaagaggtgcacaaaatgcacatgtgttagaaaaa
ggctatcagaatataaaaacctatggagcggtaaaagatgtttcatggttagacttgcag
caatatgtaattcaattgttgaaccaaggggtattagatattaattttagggagggagca
aggcttggattaacaaccttagcgaaagaggtattgttttctggtaaaaagattcaattg
gctgttttacagaaagaaactgagaagagaaaagctgcgcctaaatctagtattaagaaa
accgatttgtttgaaaaacttagagtacttagacagcaaattgcaattgaacagaatgta
cctgcatatgtagtttttggagatgccagtttaaaagatatggaagtcaagctccctaaa
aatgagaaggagtttatggacgtttctggggtagggcaggcgaaattagaaaaatatgct
gttgtatttttagaagaaattaaaaagcatgtgggcactaaaaaatccaaacgaaaaaca
cacgaccaaactttcgatttgttttctgagggattaacggtttctgaaattgcgacagcc
cgaaatttatctgagaatactatttacggacatttgatgaaaaaacataccgaaggagag
gagctcgatttaaatcagtttgtgagtattgaggatatttcgaaaatagaaaatgccaag
tctcaattaaccgatgttaccggtctaaaagattactttgaattttttgaagagaaaatg
ccgtattggaaaattaagcttgcattgtatatgttagattcttaa
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