Palleronia sp. THAF1: FIU81_08245
Help
Entry
FIU81_08245 CDS
T06247
Symbol
ykoU
Name
(GenBank) putative ATP-dependent DNA ligase YkoU
Organism
maru
Palleronia sp. THAF1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
QFU08662
UniProt:
A0A5P9J6Y9
LinkDB
All DBs
Position
1610056..1611651
Genome browser
AA seq
531 aa
AA seq
DB search
MKRFTQLFTALDQTTKTNAKVDALAAYFKDAPEDDRLWTIALLSGRRPKRAITANLLRGW
AAEKAGIPLWLFEESYPIVGDLAETMALVLPDATRDSDRTLTDWIGTVRALAGEDEATKK
AGILDAWDQLPARERFVFNKLLTGGFRMGVSQKLMTRALSRATDIPESDLAHRLMGEWTP
ENTSFETLIRAHDPEVDLSKPYPFYLAYQLDNGPETLDSPPEDWAAERKWDGIRGQLVLR
GGQHFLWSRGEELMTHRFPEFARLTDYIPPGTVIDGEVLAWGDDAPMSFNALQKRIGRKT
VPKKLLTEAPAILYAYDLLEWQGEDIRQRPFSQRRALLETLSADLPPDAPLKVSPLLSFK
TWDALTEIRADSRAHQSEGLMLKRKDAPYRDGRKKGDWWKWKVDPLTIDAVMIYAQQGSG
RRANLFTDFTFAVRDGDALVPFTKAYSGLTDAEFRKITAWVRKNTLERYGPVRQVTPEHV
FEIAFEGIQESPRHKSGVALRFPRMSRWRHDKPMSEANTLDDLKQMLAAYG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggttcacccagcttttcaccgcgctcgaccagacgaccaagacgaacgccaag
gtcgacgccctcgccgcctacttcaaggacgcgccagaggacgaccgcctgtggaccatc
gccctgctgtcgggccgccgccccaagcgcgccatcaccgctaacctgctgcgcggctgg
gccgccgaaaaagccggtatccccctgtggttattcgaggaatcctatccaatcgtcggc
gatctggccgaaaccatggcattggtcttgcccgacgccacccgcgactccgaccgcacc
ctgaccgactggatcggcacagtccgcgcgttggcgggtgaagacgaggccaccaagaag
gccggtatcctggacgcgtgggaccaactccccgccagagagcgcttcgttttcaacaag
ttgctcaccggcggcttccgcatgggcgtcagccaaaagctcatgacccgcgccctgtcc
cgcgcgaccgacatcccagagtccgatcttgcccaccgtctcatgggcgaatggaccccg
gaaaacaccagctttgaaaccctcatccgcgcgcacgacccggaggtggacctgtccaag
ccctacccgttctaccttgcctatcaactggacaacggccccgaaacgcttgactcgccg
cccgaggattgggccgccgaacgcaaatgggacggcatccgcggccagcttgtcctgcgc
ggcggacagcacttcctgtggtcccgcggcgaagagctgatgacccaccgctttcccgaa
ttcgcccgcctgacagactacatcccgcccggcacggtcatcgacggagaggtgctggct
tggggcgacgatgcccccatgtccttcaacgcactgcaaaaaaggatcggccgcaagacc
gttccgaagaagcttctgaccgaagcgcccgccatcctctacgcctacgacctgctcgaa
tggcagggcgaagacatccgccagcgccccttttcacagcgtcgtgccctgttggaaact
ctttcagccgacctgcccccggacgcgccgttaaaggtttcgccacttctgtcgttcaag
acgtgggatgcgctgacagaaatccgcgcagacagccgcgcccaccaatccgaaggcctt
atgctgaagcggaaagacgcgccttatcgcgatgggcgcaagaagggcgactggtggaaa
tggaaggtcgatccgctgaccatcgacgcggtgatgatatacgctcagcaaggctctggc
cgccgcgcaaacctgttcaccgatttcacattcgccgtccgcgacggtgacgcgctcgtg
cccttcaccaaggcctactccggtctcacggacgccgagttccgcaagatcaccgcttgg
gtccgcaagaacacgttggaacgctatggccccgtccggcaggtcacgccagagcacgtg
ttcgaaatcgcattcgaaggcatacaggaaagcccccgccacaaatccggtgtcgccctg
cgctttccgcgcatgtcccgctggcggcacgacaagcccatgtcagaggcgaacacgctg
gatgacctgaagcagatgctcgccgcatacggttaa
DBGET
integrated database retrieval system
