Myxocyprinus asiaticus (Chinese sucker): 127413743
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Entry
127413743 CDS
T08782
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
masi03009
]
127413743
03036 Chromosome and associated proteins [BR:
masi03036
]
127413743
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127413743
Ribosome biogenesis [BR:
masi03009
]
Eukaryotic type
Pre-60S particles
Helicases
127413743
Chromosome and associated proteins [BR:
masi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
127413743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
DUF4764
Gly_acyl_tr_C
PNISR
Motif
Other DBs
NCBI-GeneID:
127413743
NCBI-ProteinID:
XP_051507105
LinkDB
All DBs
Position
23:708506..761684
Genome browser
AA seq
719 aa
AA seq
DB search
MSSCSTTSNMPAKIHSEGDHITHMEEVENGLEMMKKKKIKKMKEKKTTAATDECECPAPK
KRKSEQLTTDVNGNMDTNTIKKKKKMKVKAADATDGSEMLQTSSSAEISSEQPAAASDSD
MEKETPEQREGAFANFRISQDTVKLLQARGVTYLFDIQVKTFNSVYDGKDLIGQARTGTG
KTFSFAIPLVEKLQSGAADKRRGRAPKVLVLAPTRELAIQVSKDFKDVTRKLSVTCFYGG
SSYNPQLDAIRSGIDILVGTPGRIKDHLQNNKLDLSQLKHVVLDEVDQMLDMGFAEQVEE
ILSMSYKKDAEEKPQTLLFSATCPHWVYDVAKKYMRSQYIHVDLIGKKTQKAATTVEHLA
IACHWSQRASVIGDVIQVYSGSHGRTIVFCETKKEATELSMNTSIKQSAQTLHGDIVQKQ
REVTLKGFRNGIFEVLVATNVAARGLDIPEVDLVIQCSPPKDVESYIHRSGRTGRAGRTG
VCICFYQRNEENQLKFVEQKAGITFKRVGVPTANDIIKSSSKDAVRFLDSVPAAAVEYFR
QAASELIEQRGAVEALAAALAHISGATSLEQRSLINSDAGFTTLILNCSQEMHSMGYAWH
GLKEQLGEQVEDHIKHMNFLKGKKGVCFDVPASKLKEIQDKWQDGRRWQLTVATELPEME
QSVRHSGERLAGGFGGRGGGGRRSFGGNFKGSNGFSRGRGRGRGRGGAQKRSFSQAFDY
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctgctcgacaacatctaacatgccggcaaagatccacagtgaaggcgatcac
atcacacacatggaggaggtggagaacggactggagatgatgaagaaaaagaaaataaag
aaaatgaaagaaaagaaaacaacggcagcgacagacgagtgtgaatgtccagctcctaaa
aagaggaagagcgagcagttaaccaccgatgtgaatggaaacatggacacaaacaccatc
aagaagaagaagaagatgaaggtaaaagcagcggacgcgacagacggatcagagatgctc
caaacctcttcatcagcagagatcagcagcgagcagccagcagcggccagtgacagcgac
atggagaaggaaactcctgagcagagagaaggagcgtttgccaacttcaggatctcacag
gacaccgtcaaactcctgcaggcacgcggcgtcacgtacctctttgacatccaggtgaag
acgtttaactcagtttatgatgggaaagatctgattggtcaggcgagaaccggcactgga
aaaaccttctcattcgccattccactggtggagaaactgcagtctggagcagcagataag
agacgaggacgagcccctaaagtgttggttcttgcaccgactcgagagctcgctattcaa
gtgtccaaagacttcaaagacgtcaccagaaaactatctgtcacgtgtttctatggagga
agctcctacaacccacaactcgatgcaatccgcagtggcattgacattctggtgggcaca
ccaggtcgaatcaaagaccacctgcagaataacaaactggatctgtctcagctcaagcac
gtggttttggatgaggtggatcagatgttggacatgggctttgctgaacaggtggaggag
atcctctccatgtcctacaagaaagatgcagaagagaagccgcaaacgctgctgttctcc
gccacgtgtcctcactgggtttatgatgtggccaagaaatacatgcgctcgcagtacatt
catgtggatctgattgggaagaagacgcagaaagccgctaccacagtggagcacctggct
attgcgtgtcactggtcacagagagcgtcagtcatcggtgatgtcatccaggtgtacagc
ggcagtcacggccgaaccattgtcttctgtgagaccaagaaagaagccacagagctctcc
atgaacacctccatcaaacagagtgcgcagacgctgcacggagacattgttcagaaacag
agagaggtcaccctgaagggcttcaggaatggcatctttgaagtgttggtggccactaac
gttgctgctcgcggtctggacatcccagaggtggatctggtcattcagtgttctcctcca
aaggatgtggagtcttacatccatcgctcaggacggacgggcagagctgggcgaactggt
gtctgcatctgtttctaccagcgcaacgaggagaaccagctgaaatttgtggagcagaaa
gcgggcatcacattcaaacgtgttggagtccctacagccaatgacatcatcaaatcttcc
agtaaagatgccgtgaggtttctggactctgtcccagcggcagcagttgaatatttccgc
caagcggcaagtgagctcattgagcagcggggggcggtagaggcgctggccgcggcgctc
gctcacatatcaggagctacgagtctggagcagcgatcgctaatcaactctgacgctgga
tttaccacactgatcctgaactgctctcaagagatgcatagcatgggttatgcgtggcat
ggactgaaggaacagctcggagaacaagtcgaggaccacatcaaacatatgaacttcctg
aagggcaagaagggagtgtgttttgatgttcctgccagtaagctgaaggagattcaggac
aaatggcaagatggccgtcgctggcagctgaccgtcgctacagaactgccagagatggag
cagagcgtgcgtcacagcggcgagaggttggccggcgggtttggtggtcgcggtggaggg
ggacgccgctcgtttggcggaaacttcaaaggcagcaatggtttcagcagaggaagagga
cgaggaagaggaagaggaggcgctcagaaacgaagcttcagtcaggcctttgattattga
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