Myxocyprinus asiaticus (Chinese sucker): 127416314
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Entry
127416314 CDS
T08782
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127416314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127416314
Spliceosome [BR:
masi03041
]
Complex C
Other components
Step II factors
127416314
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
127416314
NCBI-ProteinID:
XP_051511564
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Position
25:complement(1830930..1861758)
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AA seq
578 aa
AA seq
DB search
MAAAVGSLVSYGSDSDSENESESATSTQKVDPDAVAHLQPLKSGGITTVAVLNSAPEVAV
KEDVETGVHLDPALKEVNYNPTFETMFAPEFGPINPFRTQQMAAPRNMLSGFTEPAHVND
FMFEQQRRTFSTFGYALDPSVDTSQVSSSSYIGAIEEAEKNKGLTVFETGPKKSEKRKKV
KGGDASDIDSFLGPWAKYQDEKDVAKPSEEEQKELDEITAKRQKRGKNEEEAPAEEKTIL
HIKDACDYQGRSYLHIPQDVGINLRSADIPDKCYLPKKQLHVWTGHTKGVSAIRLFPVSG
HLLLSCSMDCKIKLWEVYSDRRCVRTFIGHSKAVRDVCFNNTGTQFLSAAYDRYLKLWDS
ETGQCIARFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKVFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcggtgggttccctcgtttcttacggcagcgactcagattcggaaaatgag
tctgaatccgctaccagtactcagaaagtcgatccggacgcggtcgcgcatcttcagcct
ttaaaatcgggcggtattacgactgtagccgtcctgaattcagctcctgaagtcgctgtt
aaggaagatgttgagacaggtgtgcatctggatccagccctcaaggaagtcaattataac
cctacatttgagaccatgtttgctccagagtttggtccaattaacccattcagaacccag
cagatggctgcgccgagaaacatgttgtctggtttcacagaaccggcccacgtcaacgac
ttcatgtttgagcagcagcggagaacattctctacgtttggttacgctttggacccgtct
gtggacaccagtcaggtctcgtccagcagttatattggagccatagaagaggcagagaaa
aacaaagggctaaccgtgtttgagactggacccaagaaatcagagaagaggaagaaggtg
aaaggcggagatgcgtcagacattgacagtttcctgggcccctgggccaaataccaggat
gagaaagatgtggccaaaccctcagaggaggagcagaaagaattggatgagatcacagct
aagagacagaagagaggaaagaatgaagaagaagctccagcagaggagaagaccatctta
cacattaaagatgcgtgtgattatcagggccgctcgtatctacacattcctcaggacgtg
ggcatcaacctgcgatctgcagacataccagacaaatgttacttgcccaagaaacagctg
cacgtgtggaccggacacactaaaggtgtcagtgcgatccgtttgtttcccgtatctggt
catctattgctctcctgctccatggactgtaaaatcaagttgtgggaggtttatagtgac
cgaaggtgtgtgcggacatttatcggtcacagtaaagccgtgcgtgatgtgtgtttcaat
aacaccggcacacagtttctcagcgccgcctacgacagatatctcaaactctgggactca
gagactggccagtgcatcgcccgcttcacaaacagaaaggttccctactgcgtgaagttc
aaccctgatgaagacaaacaaaatctgtttgttgcaggaatgtcagacaaaaagatcgtc
cagtgggatatccgctctggtgaggtcgtacaggaatatgacagacatctgggtgccgtc
aacaccatcacgttcgtggacgagaaccgtcgattcgtcagcacctccgatgacaaaagt
ctgcgtgtgtgggagtgggatattcctgtggacttcaaatacatcgctgagcccagtatg
cattcaatgcccgctgtcacactttcacccaacggtaaatggttggcctgtcagtcgatg
gataatcaaatcctgatattcggagcgcagaatcggttccgtctcaacaagaagaaggtg
ttcaagggtcacatggtggcgggatacgcctgtcaggtggacttctccccggatatgagt
tatgttgtatccggtgatgctgatggaaagttgaatatctgggactggaagaccactaaa
ctgtaccaccggatcaaagcgcatgataaagtttgcatcagcgcgctctggcaccctcac
gagacctctaaagtcatcacctgcggctgggacggacagatcaaactctgggactaa
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