Myxocyprinus asiaticus (Chinese sucker): 127429120
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Entry
127429120 CDS
T08782
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127429120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127429120
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127429120
Spliceosome [BR:
masi03041
]
Complex A
U2 snRNP components
U2 related factors
127429120
Complex B
127429120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RSRP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
127429120
NCBI-ProteinID:
XP_051533896
LinkDB
All DBs
Position
38:41670863..41714034
Genome browser
AA seq
1043 aa
AA seq
DB search
MGRESRHYRKRSGSRGRSGSRSKSRSPESKRSKKDDHVASRNRERSRREKSRSRDRRRSR
SRDRKRQRRSRSRDRRRSRSRERRRSKSRSRGRSKEKSDNGEQFTDKKKIKEEKEEDVKT
EDQDFDQNTLEEEMRKRKERVEKWREEQRKKAMENIGEIKKELEEMKQGKKWSLEDDDDD
EEENQAPVEQEEEEEEEDEKDNGADTEEAVRMTEDDTGEELDPLDAYMEEVKEEVKKFNM
GTMRGGNDKKGGMMVTKVVTVVKTKKMPHSSKKKGELMENDQDAMEYSSEEEEVDLQTAL
TGFQTKQRKVLEPVDHQKIEYESFRKNFYVEVPDLAKMTPEEVNEYRLELEGIAVKGKGC
PKPIKTWVQCGTSMKVLNALKKHHYEKPTPIQAQAIPAIMSGRDIIGIAKTGSGKTIAFL
LPMFRHILDQRSLGEGEGPISVIMTPTRELALQITKEVKKFSKSLGLRVVCVYGGTGISE
QIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVVDEADRMFDMGFEPQVMRIV
DNIRPDRQIVMFSATFPRTMEALARRILSKPIEVQVGGRSVVCSDVEQHVILIEEDKKFL
KLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKN
GACRLMVATSVAARGLDVKHLILVVNYNCPNHYEDYVHRAGRTGRAGNKGYAYTFITDDQ
VRYAGDIIKALELSGSPVPPELEQLWTVFKEQQKAEGKSIKSSSGFSGKGFKFDETEHAL
ANERKKLQKAALGLHDSDDEDTALDIDEKIESMFNSKKRVKDFSAPGGAAGAPVGGVTGA
ATAVSGLSTVAAPSAGNIQKLEIAKKLALRIQAQKNLGAEAQDVMQQATNAILRGGTMIA
PSVSAKTIAEQQAEKINAKLNYTPVEKLEEERQNAEAAETVKRYEEELEINDFPQTARWK
VTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRL
IKEELIRLQNSYQPTSKGRYKVL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgagagtcacggcattacaggaagcgctcgggttcgagaggccggtctggcagc
aggtctaagagtcgttccccggaatcaaagcgctccaagaaagatgatcatgtcgcatca
cgcaaccgcgagcggagcaggagagagaaatcgcgcagtcgagaccgccggaggtcacgc
tccagagacaggaagagacagagacgctcgaggagtcgcgacaggagacgctcaaggagt
cgagaacgcagaaggagcaagagcagaagcagaggccggagtaaggagaagtcagacaac
ggagagcaatttacagacaagaagaaaatcaaggaggagaaggaggaggatgtgaagact
gaagatcaagactttgatcagaacacgctggaagaggagatgaggaagaggaaggagcgt
gtggagaaatggagggaggagcagaggaagaaagccatggagaacattggagagatcaag
aaggagctggaagagatgaagcaaggcaagaaatggagtctggaggatgatgatgacgat
gaggaggaaaatcaggctcccgtggagcaagaagaagaagaagaagaagaggatgagaag
gataacggcgctgacacagaggaggccgtgcgcatgacagaggacgacaccggagaagag
cttgaccctctggatgcttacatggaggaggtcaaagaggaggtcaagaagtttaacatg
ggcaccatgagaggaggaaacgacaagaagggagggatgatggtgactaaagtggtgact
gtggtgaaaaccaagaagatgcctcacagcagcaagaagaaaggagagctgatggagaat
gatcaagacgccatggagtactcttcagaggaggaggaggtggatctgcagacggctctc
acaggctttcagaccaaacagaggaaagttttggagcctgtcgatcatcagaagattgaa
tatgaatccttccgcaagaacttctatgtggaggtaccggatctggccaagatgacacct
gaggaggtgaatgaatatcgtctggagttggagggaatcgcagtgaagggtaaaggatgc
ccaaagcccatcaagacgtgggtgcagtgtggcacatccatgaaggtgttaaatgctctg
aagaagcaccactatgagaagccgactccaatccaagctcaggccatacctgccatcatg
tctggacgtgatatcatcggcatcgctaagacaggaagcggcaagaccatcgcctttctg
ctgcccatgtttcgccacattttagaccagcggtcgttaggagagggtgaagggcccatc
tcggtgatcatgacccccacacgagaactggctctgcagatcactaaagaggttaagaag
ttttccaagtctctggggctgagggtggtttgtgtgtacggcggcactggcattagcgag
cagattgcagagttaaaacgcggtgcagaaatcatcgtgtgcacaccaggacgaatgatt
gacatgttgggtgccaacagcggtcgagtcaccaatcttcggcgagtgacatatgtggtg
gtggatgaagcggatcgcatgtttgatatgggctttgaaccacaggtgatgcgaatcgtg
gataacatcagacccgaccgtcagattgtcatgttctccgctactttcccacggacgatg
gaggcgctggcgcgcaggatcctgtccaaacccatcgaggtgcaggtgggcggcaggagt
gtggtgtgctctgatgtggaacagcatgtgatcttgattgaggaggacaagaagttcctg
aagctgctagagattctgggtcactatcaggagaagggctccgtcatcatcttcgtggac
aaacaggagcatgctgacggtcttctcaaagacctgatgaaagcttcgtacccctgcatg
tcattacatggaggcatcgatcagtacgacagggacagcatcatcaacgacttcaaaaac
ggcgcgtgcagactgatggtggccacatcagtggctgcacgaggactcgacgtcaagcat
ctcattctagtggtgaattacaactgtcccaatcactacgaggactacgttcaccgcgcc
ggacgtacaggacgagctggcaacaaaggttatgcgtacacattcatcactgacgatcag
gtccgttacgctggtgacatcatcaaagctctggagctgtctggatctccagttcctcct
gaactcgagcaactgtggactgtctttaaagagcagcagaaagcggaagggaagagcatc
aagagcagcagcggcttctcagggaagggctttaagtttgatgagactgaacatgcgctg
gccaacgagaggaagaagctgcagaaagcggctttaggactgcacgactctgatgatgaa
gataccgcactggacattgatgagaagattgagagtatgtttaactcaaagaagcgcgtt
aaggatttctcggctccagggggtgctgcaggtgcaccggtaggcggggtgactggagct
gcgaccgctgtctctggactgagcactgtagcagctccatctgctggaaacatccagaaa
ctcgagattgccaagaaactggctctcagaatacaagcgcagaagaaccttggtgctgaa
gctcaggatgtgatgcagcaggcgacaaatgcaattttgcgcggcggtacgatgatcgcc
ccgtctgtctcggctaagaccatcgcagaacagcaggccgagaaaatcaacgccaaactg
aactacacgcctgtggagaagctggaggaggagagacagaacgctgaagctgctgagacg
gtcaagagatacgaggaggagttagagattaacgacttccctcagacagcgagatggaaa
gtgacatctaaagaagcgcttcagcggattggcgagtattcagaggcggccatcacgata
cgaggaacatacttccctccaggcaaagaacctaaagagggcgagcgcaagatctacctg
gccattgagagtgctaatgagctggccgtacagaaggccaaagcagaaatcactcgactc
attaaagaagaactcatccgcttacaaaattcataccaaccgaccagcaaaggacgatac
aaggttttgtag
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