Myxocyprinus asiaticus (Chinese sucker): 127429230
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Entry
127429230 CDS
T08782
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
senataxin [EC:5.6.2.-]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127429230
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127429230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SEN1_N
AAA_19
UvrD-helicase
AAA_30
Viral_helicase1
AAA_16
AAA_22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
127429230
NCBI-ProteinID:
XP_051534080
LinkDB
All DBs
Position
38:3581873..3628791
Genome browser
AA seq
2338 aa
AA seq
DB search
MMEKCLWCTTSLEAEGDAAMVALFHRYSSGQLFEREMDSLNEDLKCCLECVVEYHRARVK
VPELHKRLWEMEKARLVHVLRSMLDQELEEEEDDLFIIEDDLEQPVSKISPIEFQIRLRF
PLFEVLKYPYLLCYRELGDLVVKALCTLQDMNQSLNVFEKYQGTYLLLVHPNEKVRRWAI
DAAKTMRSVDRDAYYDLQEIFSCMFYVIELGISLDFPDLDQESYAGGTVPRLPSHLYDSH
NKKNYWLGICMLLTQLSAEAMDSLFMGQFNIPLCIINTMEGLKNEDDPASDPFWPALHCF
MVILDRLGSKVWGQIDPNMAFQTITGAASYVAEIRNIQQKTMGRMVKIEPEIDDNVVTCS
QMVYDCYGSKKTSQGSGSSSSSGICNYVIYEDMQSLVNVLDSEMGQSMRVYGSTFLWFIP
FVRSIMELPELNASYISEVIHYLCDKIRDNRNMLTGRTNLYDKVTEFFTRILIQIIELHA
SKGRMGILSRCAPKWVEVIVMCTVLSDEPWNAVPPDRMGGIHKVSSTSNSLGVVGQLPAS
GGGTGAIILGCMMLIRQLLKERIRTGSDPHSTHFLNLLNKQLRGVPNKRWSLTSSESSEL
QQCLVRVVRSFPERSGSPAIVLAPTTNLIHPNAVFAKNSISSPHLKHGDQVAGSSRAGDG
SALIKEEPLWDYENCISDEDLSGFQDIVKAKKEHTDPVLISEMRPDVKFAHIKSDLGNLS
RSSCPLNLQPVTTSEECNIRAEDDDDYDDEPLDIRRNRLMKSHKLESSDSEVDGIDVQLH
TRSTGTSMENLESSTIIISDDKVSENDERPSKEILSSCNKICPVKNGSLEDPDSPESLVR
DYDDLSESQVFEFETQQYVASAWGDLDVDASVLTNELKLDQTLKQRLEPAPNDSSPSWST
GTQLIPDENIERACPQAEDKIRQQQQPQEPAVSCALSSSKTACTAENFDKFIKPKPPPDT
SQKRNPSDKRDILQFKKPLIIEALAQEIRHNPRKCSSLSRDKGPPTTTTSTVPSHSPSSS
SVSSPYFSASMSRGVPAIVPPKKVREAVEPKSTAERLGLKKKERRAFDLSQRSLDCVAKL
RCHGQKVQVEPKQKRRRVSHTTKTSPQKCMGKGNKKLLASQDMQFFRQSREKHQRPTTIS
PTTLAPQQTKSTQPGEIHLSKPTVAAEEDCNFFPCPPPDPDHQQDTEKAAARIKNNNTSE
TIEARGDGVGNGRIESKYFQNGELTDVAVNTEGGKDAKEEVDDEWMFLTQMEPTDMELCS
QMEQFDEENGEGLFLTQRDPVDMDLDPVSESDTPGQSVSVAHKPLPLQTPHTPLSDVIHN
DDLFLKPGMSPMSQKKAKPSTTKIYSPSSRSASLVLEMEKGAKPPPAPNVVKAKVFRLPS
AIVPTKTIPTLPSPQLPQPFPSKQIPCPLSHAPKSVISFEMSSTSAPPSYKIYQRPEALA
HKPVPTRDQSPVFDLSVLTQAILKWEYWMLKNYTTFGCPVDLCSLPLKEVPLKFPSYLEY
FNTLYPLLLINSFEEMASEWLKEGRVQQYLKVQGIEYSNYTASASFIAGLNPDSEKKQHY
PKEDDLVLLWLPENTGAYANDESDFNEPPRHFGYVSWSSVSNRGPGSDSILNLTIQTRGN
VSLNSQIVCCEVIGSLVSTFREFRALCLLRNGPMLRPFLAPHMANFTHPRDDPQDLVALG
YNNDQARAIACGLAMIKRPKKTPEFLIIHGPPGTGKSKTISGLLFKLLSSGGNGVAPEGN
LPSRTRRTRVLLCAPSNAAVDSLMKKVIVIFKEKCRNINSPQGNCGDINLVRLGSERTIS
RSLKPFSLDHQTKARAERVQQTVEADVQRQKEQLDQSIENLSQHCAKAKKDSAEFKMLTE
KKLQLLKEREGLSQKIKECRGKKQETRAIVLQNAHVICCTLSTSGSIVLENAFRGHGHEP
FSCIIIDEASQAKETETLIPMLYRCPTVILVGDPNQLPPTVVSQKAKEFGYEQSLMARLC
KSLQSNPQSSPILFLSMQYRMHPEICRFPSKYIYNNALENDPETAQKRCSISWPFKPYRV
FDVTDGRENKERDSFINLKEVKLVVLLLKLLVEKKSVRVGVITPYNAQKRRILHAVRESG
IDNEHLQVEVDTVDGFQGREMDCIIMSCVRASSEMGSIGFVGNRQRMNVTITRAKFSLFI
LGHLCTLRQQSDWGALIKDAGKRGTIIKTLEPNFQSDARKILKPGILTRSRSHPPICKPS
TVTSPVTHGPMETVQAFTSRNHRSFEHHLSSSSTMASGQPQPPMPRLIPLDCPRDPQMTD
RPTDPRFAEWRPIREQRPDREGRGLSASHRLTHRATSYDRDSRNTTHSSRYPSKHHRR
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaagtgtttgtggtgtaccacatcccttgaggcagagggtgatgcagccatg
gtcgccttgtttcatcgctacagctcggggcagctgtttgaaagagagatggactctctg
aatgaagacctgaagtgctgtctggagtgtgttgtggagtatcacagagccagagtcaag
gtcccagaactgcacaagcgtctgtgggaaatggagaaggctcgactcgtacatgtattg
agatccatgttggatcaggagctggaggaagaggaggatgatctcttcatcattgaagat
gatcttgaacaaccagtgtcaaagatctctcctatagaattccaaatcagactgcgcttc
ccgctgtttgaagttctgaaatatccgtacctactctgctaccgtgagctgggtgatctg
gtggttaaggccttgtgtacattgcaggatatgaatcagtctttgaatgtgtttgagaag
tatcaaggaacatatctgcttctagttcatcccaatgaaaaggtgcgtcgttgggcaatt
gatgcagcgaaaaccatgaggagtgtggaccgggatgcctactatgacctccaagaaatc
ttctcttgcatgttttatgtgatcgagctgggaatttctctggattttccagatttggat
caagagtcttacgcagggggcactgtaccaaggcttccctctcacctctatgactcgcac
aataagaagaattactggctaggcatctgtatgttactaacgcagctaagtgctgaagca
atggactctttgttcatgggacagttcaatattccactctgcataatcaacacaatggaa
gggttgaaaaatgaggatgacccagcttctgacccattctggccagctctccactgtttt
atggtgattctggaccggctcggttctaaggtctggggtcagatagatcctaacatggct
ttccagaccatcactggagcagccagctatgttgcagaaattagaaacatccagcaaaaa
accatggggaggatggttaaaatagagccagagattgatgacaatgtggtgacttgcagt
cagatggtgtatgactgttatggctccaaaaagacaagccaagggtctggctcatcgtcc
agcagtggtatttgcaactatgtgatctatgaggacatgcaatccctggtcaatgtgctt
gattctgagatgggtcagagcatgcgtgtatacggcagcactttcctgtggttcattcca
tttgtccgttccataatggaacttccggagctgaacgcctcctatattagtgaggtcatc
cactacctttgtgataagatacgagataatcgaaacatgctaactggacggacaaattta
tatgacaaagtgaccgagtttttcacccgcatccttattcaaatcattgagttgcatgct
agtaaaggacgtatgggaatactctctcggtgtgcccccaagtgggtggaagtgattgtc
atgtgtacggttctgtcagatgaaccatggaatgctgtacctccagacaggatgggtgga
attcacaaagtcagttcaacttcaaactctctaggagtggtagggcaactacctgcatct
ggaggtggcactggtgccataattctaggttgcatgatgctgattcgacaactgctgaaa
gaaaggattcggaccggatctgacccacattctacccattttctgaatttgcttaacaag
cagctgcgtggagttccaaacaaacgatggagtctaacatcttctgaatcttctgagctt
cagcaatgtttagtaagagtggtccggtcattcccagaacgatctggttctcctgctata
gttcttgccccaaccacaaatttaatacatccaaatgctgtttttgccaaaaattcaatt
tcatccccacatctgaaacatggagaccaggtggcaggttcaagcagagcaggagatggg
tctgctttgatcaaagaggagccactttgggattatgaaaattgcatttcggatgaggat
ttgagtggttttcaggacatcgtaaaagctaaaaaggaacatactgacccagtgctgatt
tcagaaatgagacctgatgttaagtttgcgcatattaaatccgatttggggaacttgtct
agaagttcttgtcctttaaatttgcaacctgtcaccacctctgaggaatgtaatattaga
gctgaggatgatgatgattatgatgacgagcctcttgatatcagacggaaccgcttgatg
aaatcccacaagcttgaatctagtgattctgaagtggatggtattgatgtacaattgcat
accaggtccacaggaacctcaatggagaaccttgaatccagtaccatcattatctctgat
gacaaagtttctgaaaatgatgaaagaccatcaaaggagatcctgagttcttgtaataaa
atatgtccagtgaagaatggatctctagaagatccagactctcctgagagtcttgtgcga
gactacgatgatctcagtgagtcacaagtatttgagtttgagacccagcaatatgtggca
tctgcctggggtgatttggatgttgatgcatcagtcttgacgaacgagctcaaattagac
caaacacttaaacaacggctggagcctgctcctaatgactcctctccctcgtggagtaca
gggacccaactaattccagatgagaacatcgagagggcctgtccgcaagcagaggataag
atcagacaacagcagcaaccacaagagccagctgtttcatgtgcgctgtcatcatccaaa
acagcctgtactgcagaaaactttgataaattcattaaaccaaagcctccaccagataca
agccagaaacgaaatccatctgataagagagacattttgcagtttaaaaagccattaata
attgaggctcttgctcaagaaatcaggcacaacccccggaaatgcagctctttatctcgg
gataagggtcctccaactactactacatctactgtgccatctcactctccgtcctccagc
tcagtttcttcaccttatttttctgcctccatgtcacgtggcgtacctgccattgttcca
ccaaagaaggttcgtgaagctgtagagccaaagtcaacagcggagcgtttgggattgaaa
aagaaggaaagaagagcttttgatctttctcagcgttccctggattgtgttgctaaactg
cggtgccatggccagaaagtgcaagtggagccaaaacagaagaggagacgagtgtctcat
accactaagacctctccacagaaatgtatgggaaagggcaacaagaaacttttggcatct
caagacatgcagtttttcaggcaaagtcgtgagaagcatcagaggccaacaactatatcc
cccacaacactggctccccaacagacaaagagcacccaaccaggtgaaatacacctgtca
aaacctacagttgcagccgaagaggattgtaatttctttccttgtcctccgccagatcct
gaccatcagcaagatactgaaaaggctgcagccagaataaaaaacaacaacactagtgaa
accattgaggctagaggggatggggttggaaatggtaggatagagtccaaatactttcaa
aacggtgagcttactgatgtcgctgtcaacacagaagggggaaaagatgcaaaagaggag
gttgatgatgaatggatgttcctcactcagatggaacccacagatatggaactatgctcc
caaatggaacagtttgatgaagaaaatggtgaaggactgtttcttacccagagagatcct
gttgacatggaccttgatccagttagtgagtcagataccccagggcagtcagtatcagta
gcacataaacctcttcctctgcagactcctcacaccccactttcagatgtcatacataat
gatgatttgttcctgaagcctggtatgtcacccatgtcccagaaaaaggccaaaccttcc
actacaaaaatatacagtcccagctcccgcagtgcgtcacttgtcctagaaatggagaaa
ggggccaagcctcctcctgcaccaaatgttgttaaagctaaggttttccgtttgccttca
gcaattgtacccaccaaaacaattcctactttgccttctccacaattgccacagccattc
ccttctaaacaaattccctgccctctgagccatgcccctaagtcagtcattagttttgaa
atgagctctacatctgcaccaccatcttacaaaatatatcaaagacctgaagctctagct
cacaaaccggtgcccacgagagatcaaagcccggtgtttgacctttcagtcttgacccaa
gcaatacttaagtgggaatattggatgcttaagaactacacaacatttgggtgtccagtt
gacctgtgctcactgccactgaaggaagtcccattgaaattccctagctacctagagtac
tttaacaccttgtaccctctgctgctaattaactcatttgaagagatggctagtgaatgg
ctcaaggaggggagagtccaacaatatcttaaggtccagggtattgagtacagcaattac
acagctagcgccagcttcatagcgggccttaatccagacagtgaaaagaaacaacattac
cccaaagaggatgaccttgtgctgctgtggctgccggagaacactggggcatatgcaaac
gatgaatccgatttcaatgaaccaccacgtcattttggttatgtgtcctggtccagtgtt
tccaacagaggaccaggttctgactcaatcctaaacctgactatccagacacgtggtaac
gtatctttgaattcccagattgtgtgctgcgaagttattggatctttggtcagcacattc
cgggagttccgtgcactgtgtttgctgcgaaatggaccaatgttgcgtccttttcttgct
ccacatatggcaaatttcacacatcctagggatgacccacaggacctggttgcactaggg
tacaacaatgaccaggccagagcaatagcctgtggtcttgccatgataaagagaccaaag
aagaccccagagtttctaattattcatggtcctccaggaactgggaagagtaaaaccatt
agcggcctgctgtttaaactcctgtcttcggggggtaatggtgttgctccagaggggaac
cttccctccaggactcggcggacacgcgttctgctctgtgctccctctaatgctgccgtc
gacagtctgatgaagaaagtcattgtgatctttaaagagaaatgccgtaatatcaacagt
ccgcaaggtaattgtggtgacataaacctggtaaggttaggaagtgagagaaccatctca
agatctctgaaacccttcagccttgaccaccagactaaagcgagagcagagcgagtccag
cagactgtagaagctgatgtacaaaggcagaaggagcaactggaccagagcattgaaaat
ctctcccagcactgtgcaaaggccaaaaaggattccgctgagttcaagatgttgacagag
aaaaagttgcagcttctaaaggagagagaaggactgagtcaaaagattaaagagtgtcgt
ggtaagaaacaggaaactcgggccattgtgctgcagaatgctcatgtgatctgctgcacg
ctcagcaccagtggaagtatcgttcttgagaacgcattccgtggacatggacatgaaccc
ttcagctgcatcatcatcgatgaggctagtcaggcaaaagaaacggagacgttgatcccc
atgttataccgatgccctaccgtaatccttgttggtgatcccaatcagcttcctccaacg
gtggtctcccagaaagcaaaggagtttggctatgagcagtctcttatggcgaggttatgt
aaaagccttcagtcaaaccctcaatcctctcccatcctcttcctcagtatgcagtaccgc
atgcaccctgaaatctgcagattcccctcaaagtacatctacaacaatgcgcttgagaat
gaccctgagacggctcaaaaacgctgttccatcagctggcccttcaagccctacagagtg
ttcgacgtgactgatggacgagagaataaagagagagattcatttattaacctcaaagag
gtgaagctggtagtgctgctgctgaaacttctggttgagaagaagtctgtgcgggtgggt
gtcatcacgccctacaatgcccagaaacggcggatactgcatgccgtcagggagtctggc
atcgataacgaacaccttcaggtggaagtggatactgtcgatggctttcagggcagagaa
atggactgcatcattatgtcttgtgtgagagccagcagtgaaatgggttccatcgggttt
gtcggaaatcggcagaggatgaatgtgaccattacgagagccaaatttagtctcttcata
ctaggacacctatgcacactccggcaacagagcgattggggagcgttgatcaaggacgcc
gggaaacgtggaactataatcaagacactggagccaaatttccaaagcgacgctagaaag
atccttaaaccaggtatactgacccgcagtcgctctcatccacctatttgcaaaccaagc
actgtgacatcgcctgtcacgcatggccccatggaaaccgttcaagccttcacatcacgt
aaccaccgcagttttgagcaccatctgagcagctcctccactatggccagtggtcagcca
caaccgccaatgccacggctgatacctttggactgccctagagaccctcaaatgactgac
agacccactgacccccgctttgcagagtggcggccaatcagagaacagaggccggacaga
gaggggcggggcttatcagcatcacaccgtctgacacacagagccacatcgtatgatagg
gactctcgaaataccacccactcttctcgatacccttcaaaacaccacaggagataa
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integrated database retrieval system
