Myxocyprinus asiaticus (Chinese sucker): 127430643
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Entry
127430643 CDS
T08782
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127430643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127430643
Enzymes [BR:
masi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127430643
Spliceosome [BR:
masi03041
]
Complex A
U2 snRNP components
U2 related factors
127430643
Complex B
127430643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
127430643
NCBI-ProteinID:
XP_051536520
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All DBs
Position
40:1992724..2017071
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AA seq
1038 aa
AA seq
DB search
MMGRESRHYRKRSGSRGRSGSRSKSRSPDSKRSKKDEPAGSRNRERSRREKSRSRDRRRS
RSRDKKRQRHSRSRDRRRSRSRERKRSRSRGRSKEKSDNGEQSTDKKKIKEEKEEEKTED
QDFDQNTLEEEMRKRKERVEKWREEQRKKAMENIGEIKKELEEMKQGKKWSLEDDDDDEE
ENQALVEQEEEEDEKEKAADMEEATCMAEEDIGEELDPLDAYMEEVKEEVKKFNMGTMRG
ENDKRGGMMVTKVVTVVKTRKMPQSSKKKGELMENDQDAMEYSSEEEEVDLQTALTGFQT
KQRKVLEPVDHKKIEYESFRKNFYVEVPELGKMTPEEVSEYRLELEGIAVKGKGCPKPIK
TWVQCGTSMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDIIGIAKTGSGKTIAFLLPMFR
HILDQRQLGEGEGPISVIMTPTRELALQITKECKKFSKSLGLRVVCVYGGTGISEQIAEL
KRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVVDEADRMFDMGFEPQVMRIVDNIRP
DRQIVMFSATFPRTMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEDKKFLKLLEI
LGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRL
MVATSVAARGLDVKHLILVVNYNCPNHYEDYVHRAGRTGRAGNKGFAYTFITDDQARYAG
DIIKALELSGSAVPPELEQLWTVFKEQQKAEGKSIRSSSGFSGKGFKFDETEHALANERK
KLQKAALGLHDSDDEDTALDIDEQIESMFNSKKRVKDFSAPGGAAGAPVVGVTGAATAIS
GLSSVAAPSAGNIQKLEIAKKLALRIQAQKNLGAEAQDVMQQATNAILRGGTMIAPSVSA
KTIAEQQAEKINAKLNYTPVEKLEEDRQNAEASETVKRYEEELEINDFPQTARWKVTSKE
ALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEEL
IRLQNSYQPTSKGRYKVL
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtcgagagtcgcggcattacaggaagcgctcgggttcgaggggtcggtccggc
agcaggtccaagagtcggtccccggactcaaaacggtccaagaaagacgaaccggccgga
tcacgcaaccgcgagcggagcaggagagagaaatcacgcagtcgagaccgccggagatca
cgctcccgagacaagaagagacagaggcactctaggagtcgtgacaggagacgctccagg
agtcgagagcgcaagaggagcaggagtagaggccggagtaaggagaagtccgacaatgga
gagcaatctactgacaagaagaaaattaaggaggagaaggaggaggagaagactgaagat
caagactttgatcagaacacgctggaggaggagatgaggaagaggaaggagcgtgtggag
aaatggagggaggagcagaggaagaaagccatggagaacatcggagagatcaagaaggag
ctggaagagatgaagcagggcaagaaatggagtctagaggatgatgatgatgacgaggag
gagaatcaagctctggtggagcaggaagaagaagaggacgagaaagagaaagccgctgac
atggaggaagccacatgcatggcagaggaggacatcggagaggagctcgacccgctggat
gcctacatggaggaggtcaaagaggaggtcaagaagttcaacatgggcaccatgagagga
gaaaacgacaagaggggagggatgatggtgactaaagtggtaactgtggtgaagaccagg
aagatgcctcagagcagcaagaagaaaggagagctgatggagaacgatcaggacgccatg
gagtactcctcagaggaggaggaggtggatctgcagacggctctcacaggctttcagacc
aaacagaggaaagttctggagcctgtcgatcataagaagattgaatatgaatccttccgc
aagaacttctatgttgaagtaccggagctgggcaagatgacgcctgaggaggtgagtgaa
tatcgtctggagttggagggaatcgcagtgaagggtaaaggatgcccgaagcccatcaag
acatgggtgcagtgtggcacatccatgaaggtgttaaacgcgctgaagaaacacaactat
gagaagccgactccaatccaagctcaggccatacctgccatcatgtccggacgcgacatc
attggcatcgctaagacgggaagcggtaagaccatcgccttcctgctgcccatgtttcgc
cacattttagaccagcggcagttaggagagggtgaagggcccatctcggtgatcatgacc
cccacacgagaactggctctgcagatcactaaagagtgtaagaagttctccaagtctctg
gggctgagggtggtctgtgtgtacggtggcacgggcatcagcgagcagattgccgagttg
aaacgcggtgcggaaatcatcgtgtgcacaccaggacgaatgattgacatgttaggtgcc
aacagcggtcgagtcaccaatctccgtcgagtgacgtatgtggtggtggatgaagcggat
cgcatgtttgatatgggctttgaaccacaggtgatgcgtatcgttgataacatcagacct
gaccgtcagatcgtcatgttctctgctacattcccgcggaccatggaggcactggcgcgc
aggatcctgtccaaacccattgaggtgcaggtgggcggcaggagtgtggtgtgctccgat
gtggaacagcatgtgattgtgattgaggaggacaagaagttcctgaagctgctggagatt
ctgggtcactatcaggagaagggctctgtcatcatcttcgtggacaaacaggagcacgca
gacggtctcctcaaagacctgatgaaagcttcatacccctgcatgtcattacacggaggc
attgatcagtatgacagagacagcatcatcaatgacttcaaaaatggtgcgtgcagactg
atggtggccacgtcagtggctgcacgaggactcgacgtcaagcacctcattctagtggta
aattacaactgtcccaatcactacgaggactatgtccaccgcgctggacgcacgggacga
gctggcaacaaaggttttgcatacacatttatcactgatgaccaagcccgttacgctggt
gacatcatcaaagctctggagctgtctggatctgcggttcctcctgaactcgagcagctg
tggaccgtctttaaagagcagcagaaagcggaggggaaaagcatcaggagcagcagcggt
ttctcagggaaaggctttaagtttgacgagactgaacacgcactggccaatgagaggaag
aagctgcagaaagcggcgttaggactgcacgactctgatgatgaagacaccgcactggac
atagatgagcagattgagagtatgtttaactccaagaagcgtgtgaaggatttctcggct
ccagggggcgccgcaggggcaccggtggttggggtgactggagctgcgaccgccatctct
ggactgagcagtgtagccgctccatctgctggaaacatccagaaactcgagatcgccaag
aaactggctctcagaatacaagcgcagaagaatcttggtgctgaagctcaggatgtgatg
cagcaagcgacaaatgccatcttgcgtggcggtacgatgatcgccccatctgtctcagct
aagaccattgcagagcagcaggcagagaaaatcaacgccaaactgaactacacgcctgtg
gagaagctggaggaggaccgacagaatgctgaagcttctgagactgttaagagatatgag
gaggagttggagatcaacgacttccctcagacggcgagatggaaggtgacgtctaaagag
gcgcttcagcggatcggcgagtattctgaggcggccatcacgatacgaggaacatacttc
cctccaggcaaagaacccaaagagggcgagcgcaagatctacctggccattgagagtgct
aatgagctggccgtccagaaggcaaaagcagaaatcactcgcctcattaaagaagaactc
atccgcttacaaaattcataccaaccgaccagcaaaggacggtacaaggttctgtag
DBGET
integrated database retrieval system
