Myxocyprinus asiaticus (Chinese sucker): 127432577
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Entry
127432577 CDS
T08782
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03022
Basal transcription factors
masi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127432577
09124 Replication and repair
03420 Nucleotide excision repair
127432577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
masi03021
]
127432577
03400 DNA repair and recombination proteins [BR:
masi03400
]
127432577
Transcription machinery [BR:
masi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127432577
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127432577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
127432577
NCBI-ProteinID:
XP_051539804
LinkDB
All DBs
Position
4:complement(43553473..43557949)
Genome browser
AA seq
393 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEVLKEDESGSLKATVEDILFQAKRKRVFESHGQVRLGMMRH
LFVVVDSSRSMEDQDLKPNRLTSTLKLMEYFVEEYFDQNPISQIGIITTKNKRAEKLTDL
AGNPKKHIAALKKAVDSACIGEPSLYNSLNIAMQTLKHMPAHTSREILVIFSSLTTCDPA
NIYDLIKTLKGLKIRVSVIGLSAEVRVCTILTRETGGTYNVILDESHFKELLTLQVKPPP
ASSSSECSLIRMGFPQHVIASMSDQDAKPSFSMAHLDSTSDGPGLTLGGYYCPQCRAKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLDAFQETPLEEYEGERFCEACQGELKDKSVFT
CPSCKKVFCVECDLFIHDTLHCCPGCMHTDGMS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagaaccaaacgctgggaaggaggatacgaacgtacatgggag
gtgctgaaggaggatgagtctggatcactcaaggctactgttgaggatattcttttccag
gcaaagaggaaaagagtatttgagagtcatggacaagttcgacttgggatgatgcgccac
ctttttgtggttgttgactcatctagatcgatggaagatcaagaccttaagcccaacaga
ttgacctccaccttgaagctgatggaatattttgtggaggaatactttgatcagaaccca
atcagtcagataggaatcattaccaccaagaacaaaagggcggaaaaactgactgatctg
gcagggaatcctaagaagcatatagcagctctgaagaaggctgtggactctgcgtgtatt
ggagagccatccctctacaactctctgaacatagctatgcagactctgaaacacatgcct
gctcatacaagcagagagatcctggttattttcagcagtcttaccacctgtgatccagcc
aacatctatgatcttattaaaactctgaaaggtttgaaaatcagggtgtctgtaattggt
ctgtcggcagaggttcgagtgtgcaccatcctcacaagagaaacaggaggaacctacaat
gtgatactggatgagagtcactttaaagagctgctgacattgcaggtgaagcctcctcct
gccagctcctcctcagagtgttcccttatccgcatgggttttccccagcacgtcatagct
tccatgtcagatcaggatgccaaaccctctttcagcatggcgcacctggacagcacctcc
gatgggccaggactcactcttggcggatactactgcccacagtgcagagccaaatacact
gagctccccgtggagtgcaaagtgtgtggtctgactttagtttctgctcctcacctggcc
cgttccttccatcacctcttccctctggatgctttccaggagaccccactggaggagtat
gagggagagagattctgtgaagcttgccaaggagagttaaaagacaaaagtgtgtttacg
tgtccatcatgtaagaaagtgttctgtgtagagtgtgatctcttcatacatgataccttg
cactgctgtcccgggtgcatgcacactgatgggatgtcctga
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