Myxocyprinus asiaticus (Chinese sucker): 127436639
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Entry
127436639 CDS
T08782
Name
(RefSeq) transcription factor SOX-5-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
masi03000
]
127436639
Transcription factors [BR:
masi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127436639
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
127436639
NCBI-ProteinID:
XP_051546847
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All DBs
Position
47:complement(15872402..16191234)
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AA seq
758 aa
AA seq
DB search
MLTEPELPQEFNRMSSKRPASPYGGTDGEVVMATSRQRLEDEEVDGHAVIHLPLSSYCSK
VSPRSPRLLDSPPTLHANMDQDGSKGLALSPYPQHNSSTSPSKQQQEEGSMRPGSEPSSA
AALGTPERRKGSLADVVDTLKQRKMEELIKNEPDEAPSIERLMSKDWKDKLLAMGSGNFG
EIKGTPDSLAEKERQLMGMITQLSSLREQLLAAHEEQKKLAASQIEKQRQQMELAKQQQD
QIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAAQQGFLIPPGF
NYKPGCSDPYPIQLIPTSMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGAKHSTVPQAN
LATGTLSPTSGQSEKNRSTPPPKPKDEGAQPLNLSSKPKASESKSPTSPTSPQVPTLKLG
PGSLKHSAPSSIGGPPSRLSSIDLLSSITSGGYLNDHEAVTKAFQEARQMKEQLKREQQV
LDAKVAAVNSLTLNNDKAALESLSQQLKQSEESKFTHAMMDFGISGDSDGSPSVSDSRIF
REARGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQ
PYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFTVG
QQTQLPLSSAGVVYPNTLSMAGMPSPQIPSEHSSMSSSPEPAPPTSQHSYLSAHKGEGPR
VKEEDLRMDGGNGDAYDDFDYEDDDADYGSDSENHIAQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgagcctgagcttcctcaggagtttaacaggatgtcttccaagcgaccagcc
tctccatatgggggaacagatggagaggtagtcatggcgacgagcagacagcgattggag
gatgaagaggttgatggacatgctgtcattcacttgcccctgagttcgtactgcagcaaa
gtgtcaccgcgatctcctcgcttgctcgacagccccccaacactacatgctaacatggat
caggatggcagtaaaggcctggccctgagcccctacccccagcacaactcgtctacctca
cccagtaaacagcagcaggaggaggggtccatgcggccggggagtgagcccagctccgcc
gcagccctgggaacaccggaacgacgcaaaggcagcctggccgacgtggttgacacgctc
aaacagcgcaagatggaggaactgatcaagaatgagccagatgaggcccccagcattgag
aggctgatgtctaaggactggaaggacaagctgttggccatgggttctggcaactttgga
gagatcaaaggtaccccggacagcctggcggagaaggagcgccagttgatggggatgatc
acacagctcagcagtctcagagagcagctactggccgcccatgaggagcagaagaaactg
gccgcctcacagatcgaaaaacagcgccaacaaatggagctcgcaaaacagcaacaagac
cagattgcacgacaacagcagcaacttctgcagcaacaacacaaaatcaacctcctacag
caacagatccagcaggtccagggtcagctgcctccattgatgatacctgtgtttcctcca
gatcagagaactttggcggctgccgcagcccaacaaggatttctgattcctccagggttc
aactacaaaccaggctgcagtgacccttaccctatacagctgatccctacttctatggca
gctgctgccgcggcaactcctggccttggtcctcttcagctccagcagttgtatgcagct
cagctggctgccatgcaggtgtctccaggggccaaacacagcacagtgcctcaggccaac
ctggcaaccggcacactctcgcccaccagcggccagagcgagaaaaacagaagcaccccg
ccaccaaagcccaaggacgagggcgctcagcccttgaatctgtcgtccaagcctaaggca
tccgagagcaagtcacccacctcccccacttccccacaggtccccaccctgaagctgggc
cccggatccctgaagcatagcgccccctccagcatcggaggaccgccatccagactcagc
tccatagatctgctgtcatccatcacctctggtggctacctgaacgaccatgaggccgtg
accaaagcattccaagaggcacgacagatgaaggagcagctgaagagagagcaacaggtt
ctggatgccaaggtggcggcagtcaacagcctgacgctcaacaacgataaagcagctctg
gagagcttgagccagcagttaaagcagtctgaagagagcaagttcactcatgctatgatg
gactttggcattagtggcgattctgatggaagtcccagtgtgtcagactcacggatcttc
agagaggctcgagggcgtggcagcagtgagccgcacatcaagagacccatgaatgccttc
atggtctgggctaaagatgagagaaggaaaatcctacaggctttccctgacatgcacaac
tctaacatcagcaagatccttggttctcgctggaagtctatgacaaacctggaaaagcag
ccatactatgaagaacaggcccgacttagtaagcagcacctagaaaaataccctgactac
aaatacaaaccacggcccaaacgcacctgcctggtggacggcaagaaactgcgcatcggc
gaatacaaggccattatgcgcaaccgcagacaggaaatgcggcagtatttcactgtaggg
cagcagacccagttgcccttgtcctcagcgggtgttgtgtacccaaacacgctctcaatg
gcaggaatgccatctccacagattccctctgagcactcaagcatgtccagtagccctgaa
ccagccccgcccaccagccagcactcatacctcagtgcccacaaaggggaggggcctcga
gtgaaggaggaggatctccgaatggatggcggcaacggcgacgcatacgatgactttgac
tacgaagacgacgacgccgactatggcagtgacagcgagaaccacatcgctcagtaa
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