KEGG   Myxocyprinus asiaticus (Chinese sucker): 127440148
Entry
127440148         CDS       T08782                                 
Name
(RefSeq) finTRIM family, member 82
  KO
K12006  tripartite motif-containing protein 16
Organism
masi  Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:masi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:masi04121]
    127440148
Ubiquitin system [BR:masi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    127440148
SSDB
Motif
Pfam: PRY zf-C3HC4_4 SPRY zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 U-box zf-RING_6 DAHL EzrA DUF5446
Other DBs
NCBI-GeneID: 127440148
NCBI-ProteinID: XP_051552536
LinkDB
Position
4:39410904..39418159
AA seq 575 aa
MADQMSSDYFSCPLCTELLRDPVAIPCGHSFCMDCISGYWNEADYTGIYICPQCQITFTQ
RPVLRPNATLTKVAEKIKKTGLNLNLMPPSNGSFAGPGDVPCDYCTGKKLKAVKSCLNCL
ASYCEKHLKPHYESATFKRHKLVDELGNLDRKICPQHQKSLELFCRTDQMCICAICTVSE
HKGHDIISAEAERGEKQKLLGVSQAEIKQKCQQRTKELEELKTAVDSLKSSAQRAMVESK
KMFDEMITSIERMRSEVTKLININERAAFSQAEGLMERLEQEIDELKKKETGLKQLYSTE
DHIHFLQNFNYLCTPTDDGFIPRVSLNPDFSFSAARKAVAEIKEKLEELGREELRKVTKS
VNEVPVYTLEKRTKEKSTRVKEVYTVDSAPPAEPKSRSEFLKYYCQLRLDPHTAHKELYL
SEGNKKVIRTRDLQPYSDNQERFDSFAQILCREALSGGRFYWEIEWSGEFSIGVAYRGIS
RKGKGSLCLLGYNNKSWSLLCSDSGYSAWHDRVDKAVSGPHSSRIGVYLDHPAGVLAFYS
ISETMTRLYRFETTFTEPLYPGFGVGTSVKICQLK
NT seq 1728 nt   +upstreamnt  +downstreamnt
atggctgatcaaatgtcttcagattacttcagctgccctctatgtacggagctcctgagg
gacccagtggcgatcccgtgcggtcacagcttctgcatggactgtattagcggctattgg
aatgaggcagattacactggcatctacatctgtccccagtgtcagatcacattcacccag
agacctgtgctcaggccaaacgctactctcaccaaagttgccgagaaaatcaagaaaact
ggcttaaacctcaatttgatgcctcccagtaatggaagttttgctggccccggggatgtt
ccttgcgactactgtactggcaaaaagctcaaggctgtcaagtcctgcctcaactgcctt
gcttcttactgcgaaaaacacctgaaaccccactacgagtcagccacattcaagaggcac
aagctggtggatgaactggggaacctggaccgtaagatctgccctcagcaccagaagagc
ctggagttgttctgtcgcacagaccagatgtgtatttgtgccatctgtactgtcagtgag
cacaaggggcatgatattatctcagccgaagcagaaagaggtgaaaaacagaaacttctt
ggagtgtctcaggcagagatcaaacagaaatgtcagcagaggaccaaagaactggaggaa
ctcaagacagctgtagattctctgaaaagctctgcacaaagagcaatggtcgaaagcaag
aagatgtttgatgagatgatcacctccattgagaggatgagatcagaggtcaccaaactg
atcaacatcaatgagagggctgcattcagtcaggcagaggggctgatggagcgactggag
caagagattgatgagctgaaaaagaaagaaactggtctcaaacaactctacagcactgag
gaccacatccacttcttacagaattttaattatctctgcaccccaactgatgatggcttc
atacccagagtgtctctgaatcctgacttctccttcagtgcagccaggaaagctgtggct
gagatcaaagagaagctggaggagctgggcagagaggaactgcgaaaggtcacaaaatca
gtgaatgaagtacctgtgtacactctggagaaacgcacaaaggagaaaagcaccagagta
aaagaagtttatacagtggacagtgcaccacctgcagaacccaaaagcagatctgaattc
ctgaaatactactgtcagctcagactagacccccacacagcgcataaggagctgtacttg
tcggaaggaaacaagaaagttattagaacacgagacctgcagccatactctgataatcaa
gagcgctttgacagctttgctcagatactgtgtcgtgaggcactgtcaggtggccgcttc
tactgggaaatcgagtggagtggggaattctcgattggagtggcctatcggggcattagc
cgtaagggtaaaggttccctgtgcttgttgggctacaacaataagtcttggagcctcctc
tgctctgactcagggtactccgcctggcacgacagagtagacaaggctgttagtggccct
cactcttcaaggataggggtctatctggaccatcctgcaggggtgttagccttctatagc
attagtgagactatgacacgtctgtatcgttttgagaccacatttactgagcccctatat
cctgggttcggggttggaacatcagtcaagatctgccaattaaaataa

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