Myxocyprinus asiaticus (Chinese sucker): 127440148
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Entry
127440148 CDS
T08782
Name
(RefSeq) finTRIM family, member 82
KO
K12006
tripartite motif-containing protein 16
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
masi04121
]
127440148
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127440148
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
DAHL
EzrA
DUF5446
Motif
Other DBs
NCBI-GeneID:
127440148
NCBI-ProteinID:
XP_051552536
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All DBs
Position
4:39410904..39418159
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AA seq
575 aa
AA seq
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MADQMSSDYFSCPLCTELLRDPVAIPCGHSFCMDCISGYWNEADYTGIYICPQCQITFTQ
RPVLRPNATLTKVAEKIKKTGLNLNLMPPSNGSFAGPGDVPCDYCTGKKLKAVKSCLNCL
ASYCEKHLKPHYESATFKRHKLVDELGNLDRKICPQHQKSLELFCRTDQMCICAICTVSE
HKGHDIISAEAERGEKQKLLGVSQAEIKQKCQQRTKELEELKTAVDSLKSSAQRAMVESK
KMFDEMITSIERMRSEVTKLININERAAFSQAEGLMERLEQEIDELKKKETGLKQLYSTE
DHIHFLQNFNYLCTPTDDGFIPRVSLNPDFSFSAARKAVAEIKEKLEELGREELRKVTKS
VNEVPVYTLEKRTKEKSTRVKEVYTVDSAPPAEPKSRSEFLKYYCQLRLDPHTAHKELYL
SEGNKKVIRTRDLQPYSDNQERFDSFAQILCREALSGGRFYWEIEWSGEFSIGVAYRGIS
RKGKGSLCLLGYNNKSWSLLCSDSGYSAWHDRVDKAVSGPHSSRIGVYLDHPAGVLAFYS
ISETMTRLYRFETTFTEPLYPGFGVGTSVKICQLK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaaatgtcttcagattacttcagctgccctctatgtacggagctcctgagg
gacccagtggcgatcccgtgcggtcacagcttctgcatggactgtattagcggctattgg
aatgaggcagattacactggcatctacatctgtccccagtgtcagatcacattcacccag
agacctgtgctcaggccaaacgctactctcaccaaagttgccgagaaaatcaagaaaact
ggcttaaacctcaatttgatgcctcccagtaatggaagttttgctggccccggggatgtt
ccttgcgactactgtactggcaaaaagctcaaggctgtcaagtcctgcctcaactgcctt
gcttcttactgcgaaaaacacctgaaaccccactacgagtcagccacattcaagaggcac
aagctggtggatgaactggggaacctggaccgtaagatctgccctcagcaccagaagagc
ctggagttgttctgtcgcacagaccagatgtgtatttgtgccatctgtactgtcagtgag
cacaaggggcatgatattatctcagccgaagcagaaagaggtgaaaaacagaaacttctt
ggagtgtctcaggcagagatcaaacagaaatgtcagcagaggaccaaagaactggaggaa
ctcaagacagctgtagattctctgaaaagctctgcacaaagagcaatggtcgaaagcaag
aagatgtttgatgagatgatcacctccattgagaggatgagatcagaggtcaccaaactg
atcaacatcaatgagagggctgcattcagtcaggcagaggggctgatggagcgactggag
caagagattgatgagctgaaaaagaaagaaactggtctcaaacaactctacagcactgag
gaccacatccacttcttacagaattttaattatctctgcaccccaactgatgatggcttc
atacccagagtgtctctgaatcctgacttctccttcagtgcagccaggaaagctgtggct
gagatcaaagagaagctggaggagctgggcagagaggaactgcgaaaggtcacaaaatca
gtgaatgaagtacctgtgtacactctggagaaacgcacaaaggagaaaagcaccagagta
aaagaagtttatacagtggacagtgcaccacctgcagaacccaaaagcagatctgaattc
ctgaaatactactgtcagctcagactagacccccacacagcgcataaggagctgtacttg
tcggaaggaaacaagaaagttattagaacacgagacctgcagccatactctgataatcaa
gagcgctttgacagctttgctcagatactgtgtcgtgaggcactgtcaggtggccgcttc
tactgggaaatcgagtggagtggggaattctcgattggagtggcctatcggggcattagc
cgtaagggtaaaggttccctgtgcttgttgggctacaacaataagtcttggagcctcctc
tgctctgactcagggtactccgcctggcacgacagagtagacaaggctgttagtggccct
cactcttcaaggataggggtctatctggaccatcctgcaggggtgttagccttctatagc
attagtgagactatgacacgtctgtatcgttttgagaccacatttactgagcccctatat
cctgggttcggggttggaacatcagtcaagatctgccaattaaaataa
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