Myxocyprinus asiaticus (Chinese sucker): 127443689
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Entry
127443689 CDS
T08782
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
127443689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
masi03400
]
127443689
Enzymes [BR:
masi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
127443689
DNA repair and recombination proteins [BR:
masi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
127443689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
DNA_ligase_A_C
BRCT
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
127443689
NCBI-ProteinID:
XP_051558436
LinkDB
All DBs
Position
7:complement(27018716..27024848)
Genome browser
AA seq
910 aa
AA seq
DB search
MMEGASKSDATPQASVAARVPFNDLCSVLENIQKAKLRPDKAKILKEFIDSWRNFHAALH
KDNPSTKDSFYPAMRLIVPPFERERMAYGIKESMLAKLYIEVLGLPKNGPEANKLLNYRA
PTTSQGEAGDFALTAFFVLKKRCPSQGNLTIKEVNDFLDSVAINNTSKQKDQVKKSLLDL
ITQSSALEQKWLIRMILKDMKLGISKETVLQVFHPDAPELYSVTTDLNKVCIQLHDPAVS
LSEVSVDLFSAFKPMLAAVANIRQIEKQMGNRPFYIETKFDGERIQLHKAGDVYKYYTRN
AHEYTQQFGASPLEGSLTPYIHNVFKPNVVNCILDGEMMAYNPKTETFMQKGSKFDIKRL
MDDSDLQTCFCVFDILLVNNQKFGNESLKKRYETLHTVFTPIKGRIQLVSKSEGRTMQEV
VNALNEAIDNREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGGYWGKG
RRSGMLSHFLCAVAEVPSPGEKPTVFHTICRIGSGYTLKELYDLGLKLAKHWKVYNKNNP
PAAILCGTEKPEVYIEPRNSVIIQVKAAEIVSSDMYRTNCTLRFPRIERIKEDKEWHHCM
TLTELSQFRSKASGKLASRHLLIQDEQPEKKKRKLVAKPKKTIGVIDHFKSQDLSAVTKE
IDMFEDVEFCVINGNDNHSKAELEKGIARCGGIVVQNPGKDTYCVIAAVQNMRVKNLISS
DQHDVVWAAWLVECLENKQVIPWQPRHMIHMSPSTREHFAKEYDLYGDSYYVDTDEQQLR
EVFGRIGPIEAEVPSVTQVEATYAWDDLPTSMFRPYIAYFDRCADLGNPKSIIRGTCLDT
RALEFRFHGGTVVEKWKEGISHVIVEGEGRTLDLKTLRRLYTRKFKIIRESWVTDSIKAG
HVQDEIEYLI
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggtgcctcaaagagtgatgccacaccacaggcctctgttgctgcacgagtt
ccatttaacgacctctgctcagttctggagaatattcaaaaggccaaactccgaccagat
aaagccaaaatcctaaaggaatttattgattcttggaggaacttccatgcagcacttcac
aaagacaatcccagcaccaaagattcattttatccagccatgcgtctcattgtgcctcca
tttgagcgagagcgaatggcttatggtataaaagaaagcatgctagccaaactttatatt
gaggttttaggtctacctaaaaatggacctgaggcaaacaaacttttaaattacagagcc
ccgaccacatctcaaggggaagcaggtgactttgcccttacagctttctttgtcctgaag
aaaaggtgcccaagtcagggtaatttaaccattaaagaagtgaatgactttttggattct
gtagctatcaacaataccagtaaacagaaggatcaggtgaagaaaagccttttggatctg
ataactcagagctcagctttggaacaaaagtggctcattagaatgatcctcaaggacatg
aagcttggcattagcaaggaaacagtccttcaggtttttcatccagatgcaccagaactc
tacagtgtcaccacagatctgaataaagtgtgcatacaacttcacgatccagcagtgtcc
ctcagtgaggtgtctgttgatctattttctgcttttaaaccaatgctggctgcagttgcc
aatatcagacaaatagagaagcaaatgggcaaccggccattctacattgagacaaagttt
gatggtgaacgcattcagttacacaaagctggagatgtatacaaatactatacaaggaac
gctcatgagtacacgcaacagtttggggcctcaccacttgagggctccctcacaccatac
attcacaatgtcttcaaacctaatgtggtgaactgcatactggatggagaaatgatggct
tataaccctaaaactgagacctttatgcagaaaggcagtaagttcgacatcaaaaggcta
atggatgattctgacttgcaaacctgtttttgcgtctttgatatcctgttagtaaacaac
cagaagtttggaaatgaatctctcaagaagcgctatgaaactcttcacactgttttcacc
cccatcaaaggccgtatccagctggtctctaaatctgaaggtagaactatgcaagaagta
gtgaatgctctcaatgaagccattgacaatcgggaagagggaattatggttaaggacccc
atgtccatctacaaaccagataaacgtggtgaaggatggctgaaaattaagccagagtat
gtggatggtctgatggatgaactcgatctgttgatagtgggaggctactggggtaaaggt
aggagaagtgggatgctctctcattttctctgtgcggttgcagaggtgccaagtcctggg
gagaagcccacagtattccacactatctgtcgcattggttcaggctacactctgaaagaa
ctttatgatcttggcctgaagttagccaaacattggaaagtttacaacaaaaacaatcct
ccagcagccatcttgtgtgggacagagaaaccagaggtgtacatagaaccacgaaactct
gtgatcatacaagtcaaagcagcagagattgtttctagtgacatgtataggaccaactgc
acattacgtttccccagaatagaaagaatcaaagaggacaaagagtggcatcattgcatg
accttgactgaactgagtcagttccgctccaaggcttcaggaaagctggcatcccgacat
ttactcatccaagacgagcagccggaaaagaagaagcgcaaacttgtggccaagccgaag
aagaccattggtgtcattgaccacttcaaatctcaagatttatcagcagtcacaaaagag
atagatatgtttgaagacgtagagttttgtgtgataaatggcaatgataaccattctaag
gcagagcttgagaagggcatcgcccgctgtggaggcattgttgtgcagaaccctggaaag
gacacatattgtgtgattgctgctgtgcagaacatgagagtaaagaacctcatctcctca
gaccagcatgatgtggtgtgggctgcttggcttgtagagtgtctggaaaataaacaggtt
ataccatggcaaccacgtcacatgatccacatgtcaccctccacaagagagcactttgcc
aaagagtatgatttgtatggagacagttattatgttgacacagatgaacagcagctcagg
gaagtctttggaaggattggccccatagaagccgaggttccgtctgtgacacaggtagaa
gcaacgtacgcctgggatgacttgcccactagcatgtttaggccttatattgcatacttt
gaccggtgtgctgacttgggaaatccaaaaagcattatccgaggtacatgtttggacaca
cgagccttggaatttcgattccatggtggtacagtcgtcgagaaatggaaggaaggaata
tcacacgtcatagtcgaaggtgaaggaaggacactggacttaaagacactgagacgactt
tatactaggaagttcaaaatcattcgagagtcttgggtgaccgattccatcaaagcaggc
catgtacaggatgagattgagtacctcatataa
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