Myxocyprinus asiaticus (Chinese sucker): 127446830
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Entry
127446830 CDS
T08782
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Pathway
masi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127446830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
masi03041
]
127446830
Spliceosome [BR:
masi03041
]
Complex A
U1 snRNP components
U1 related factors
127446830
Complex B
127446830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
127446830
NCBI-ProteinID:
XP_051564057
LinkDB
All DBs
Position
10:complement(1284730..1356721)
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AA seq
876 aa
AA seq
DB search
MSSTDANSGSSQAAPFPGVPPSGIPPPFMGPPGIPPHFPPMGMPPMGQRPPSMAPMPPGI
MPPMMPPMGAPPMGQMPAMIPPMMPGMMMPPRMPAASIQPTGPPGVSPVESAAAPGTTST
TSTESSPDEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQMLSKCPWKE
YKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGAADVVAPGTTPALVAQSEASV
AITSVAEIEATMTTGNAEEQPSHVPTQAAEVSSDVTVNFTEETPIIETQPCNDVSKEERP
ELVKKVYKWNTKEEAKQAFKELLKEKGVSSNASWEQAMKLIINDPRYSALPKLSEKKQAF
NAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQMFGDLEVWSCVPE
RDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLDNP
TFAEDEELQNMDKEDALICFEEHIRALEKEEEDEKQKTLLRERRRQRKNRECFQKFLDEL
HDHGQLHSMSAWMEMYPTVSADIRFNNMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKD
ILKDKGFLVEVNTGFEEFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEEAR
KMKRKEAAFKSMLKQATPPLEPEATWEGVRERFLKEPAFEDITLESERKRIFKDFIHVLE
HECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDEYHSKKKKRSTSKSPSEHSSSGES
ERSYKKSKKHKKKGKKRRHKSASPESDVEKERKGREKEKDKENDKSRGKTRGESKQKSPK
RKNAKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgactgatgctaatagtggctccagtcaagcagcaccttttcctggtgttcca
ccttcaggaatccccccgccctttatgggaccaccgggaatcccgcctcacttccctcct
atgggaatgccgcccatgggccagaggcctccgagcatggctcctatgcccccgggaatc
atgccccccatgatgcccccaatgggagcaccacctatgggacagatgccagccatgata
ccaccaatgatgccagggatgatgatgcccccccgtatgccagctgcatccatccaacct
acaggaccgcctggtgtgagtccagtagaatctgcagctgctcctggaaccacaagcacc
acatcaactgagtcatcacctgatgaacagccaaaaaagaagtcagtgtggactgagcac
aaatcactggatggaaaaacatattactacaacactgaaaccaaacaatccacctgggag
aaacctgatgagctcaaatcacctgcagagcaaatgttgtccaagtgcccttggaaggag
tataagtcagacacggggaaaccctattactacaactcacagaccaaagagtctcgctgg
actaaacccaaagagctggaggatctggaagcaatgataaaggcagaggaaaatggtgcg
gctgatgttgtcgctccgggcaccacccctgcccttgtggctcagagcgaggcttctgtt
gccataacttcagttgctgagatagaggctaccatgacgacaggcaacgcagaggagcag
ccgtctcacgtgcccactcaggctgctgaggtcagcagtgatgtcactgtaaacttcact
gaggaaacgcccatcatagagacacaaccatgtaatgacgtatctaaggaggaaagacca
gagctggtgaagaaagtttacaagtggaacacaaaagaagaggcaaagcaggcatttaaa
gaactgttgaaagaaaagggtgtttcctccaatgcatcatgggagcaggcgatgaagcta
atcattaacgaccctcgatacagcgctctgcccaagctgagtgaaaagaaacaggcgttt
aatgcgtataaagtccagacagagaaagaggagaaggaagaagccagaatcaagtacaag
gaatctaaagagaccttccagcgcttcttggagaaccatgagaagatgacctccaccacc
agatacaaaaaagcagaacagatgtttggtgatctggaggtgtggtcgtgtgttccagag
agagacagactggagatctatgaggacgtgctcttttatctggccaagaaagagaaggaa
caagccaagcagctgaggaagaggaactgggaggcgctgaagaacatactggacaatatg
gccaatgtgacatacagaaccacctggtctgaagctcagcagtacctactggacaacccc
acctttgctgaggacgaggagctgcagaacatggataaggaggatgccctgatctgtttt
gaggaacacatccgtgcgctggagaaagaggaggaggatgagaaacagaaaactctgctg
cgagagagacgcagacagcgcaagaacagagagtgcttccagaaatttctggatgagcta
catgatcacgggcagctgcactccatgtctgcctggatggagatgtacccgaccgtcagt
gctgatatccgcttcaacaatatgctgggccagccaggctccacccctctggacttattc
aagttttatgttgaggatcttaaagcacgttaccatgacgaaaagaggatcataaaagac
atcctgaaggataagggcttcctggtggaggtcaacacaggctttgaagagttcggatca
gtgatcagctctgataaacgtgccaccacactggacgcaggaaacatcaaactggccttc
aacagcttgctagagaaggcagaagcacgtgaaagggagagggagaaagaggaggcgagg
aagatgaagaggaaggaggcggcatttaagagcatgctgaaacaggccacgccccctctg
gaacctgaagctacatgggagggagtgcgagagcgtttcctgaaagagccagcctttgag
gacatcaccctggagtcggagaggaagaggatattcaaagacttcattcatgttctagag
cacgagtgtcagcatcatcactccaaaacgaaaaagcactcaaagaaatccaagaaacac
cacagaaaacgttccagatctcgatctggttcagagtctgaggatgatgagtatcactca
aagaagaagaaacgttcaacgtctaaatctccatccgagcattcgtcctccggggaatcc
gagagaagttacaagaaatctaagaagcacaagaagaaggggaagaagagaagacacaaa
tcagcctctcctgagtctgacgtagagaaagagcgtaagggaagagagaaagagaaggat
aaagagaatgacaaatccagagggaaaacacgcggagaatcgaaacagaaatctcccaaa
agaaagaatgctaaagaagagggtggatgggatacatcagggagtgaacttagtgaagga
gagttggagaagaggagacgcactctattagaacagctcgacgcaccataa
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