Massilia sp. WG5: AM586_22565
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Entry
AM586_22565 CDS
T04122
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
masw
Massilia sp. WG5
Brite
KEGG Orthology (KO) [BR:
masw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
masw03009
]
AM586_22565
Enzymes [BR:
masw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
AM586_22565
Ribosome biogenesis [BR:
masw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AM586_22565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ALK98566
LinkDB
All DBs
Position
complement(2217394..2218368)
Genome browser
AA seq
324 aa
AA seq
DB search
MKDLERNSVQLVTISEEEAGQRIDNYLLRVCKGVPKSHIYRILRSGEVRVNKGRIDQLYR
LETGDVIRIPPIRIAEKAAGNAPVPGAEFAIVHEDSHLLVIDKPAGVAVHGGSGVSYGVI
EQLRAARPDAKFLELVHRLDRETSGLLLLAKKRSALTNLHEQMRDGKTDKRYLTLVSGDW
KNPRQHVRLPLHKFTTGDGERRVVVQAGGQEAHTVFNLLRKWEGFALLEAELKTGRTHQI
RVHLASSGFPIAGDEKYGDFALNKQLQKANDTRGALKRMFLHAYRITFQHPETGKPLTLT
APLPPECERFLVSLGQPTSKHTHG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacttagagagaaattctgtccagcttgtaacaatctccgaagaggaagctgga
cagcgcatcgacaactacctgctgcgcgtctgtaaaggtgtcccaaaaagtcatatttac
cgcatcctccgctccggcgaagtgcgtgtgaacaaaggacgtatcgatcagttataccgc
ctggaaacgggcgatgtgatccgcattccgccgatccgcatcgccgagaaggctgccggc
aatgcgccggtgccgggcgcggaattcgcgatcgtccatgaggacagtcacctgctcgtg
atcgacaagccggccggcgtcgccgtgcatggcggttcgggcgtgtcctatggcgtcatc
gaacagctgcgcgcagcgcgtccggacgccaagttcctggaactggtgcaccgcctggac
cgggaaacctcgggcctgctcttgctcgcgaagaaacgttcggccctgaccaatttacac
gagcaaatgcgcgatggaaaaacggacaagcgctacctgaccctggtcagcggcgactgg
aagaacccgcgccagcacgtcaggctgcccctgcacaaattcacgacgggggacggcgag
cgccgcgtggtggtgcaggccggcggccaggaagcgcataccgtgttcaacctgctgcgc
aagtgggagggctttgccctgctcgaagccgagctcaagaccgggcgcacgcaccagatc
cgcgtgcacctggcctcgagtggctttcccattgccggtgacgagaaatacggcgatttt
gcattgaacaagcagcttcagaaggcaaacgacacgcgcggcgccctcaagcgcatgttc
ctgcacgcctaccggatcacgttccagcaccccgaaaccggcaaaccgctgaccctgacg
gcgccattgccgccagagtgcgagcgtttcttggtaagcttggggcaacccacgagcaaa
catacacatggctag
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