Massilia sp. YMA4: DPH57_16195
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Entry
DPH57_16195 CDS
T05528
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
masy
Massilia sp. YMA4
Pathway
masy00521
Streptomycin biosynthesis
masy00523
Polyketide sugar unit biosynthesis
masy00541
O-Antigen nucleotide sugar biosynthesis
masy01100
Metabolic pathways
masy01110
Biosynthesis of secondary metabolites
masy01250
Biosynthesis of nucleotide sugars
Module
masy_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
masy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DPH57_16195 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DPH57_16195 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DPH57_16195 (rfbC)
Enzymes [BR:
masy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DPH57_16195 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AXA92550
UniProt:
A0A7U5Y0K7
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Position
complement(3796646..3797191)
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AA seq
181 aa
AA seq
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MKVTTTPIDGLLIIEPTVFGDDRGFFYESFNAQRFADLTGVRADFVQDNHSRSARNVLRG
MHYQIQQAQGKLVRVVSGSVYDVAVDLRKSSPTFGRWFGVELSAENKRQFWIPPGFAHGF
AVTSEFAEFLYKTTDYYAPEHERALLWNDPAVGIEWPLDGTPLLSAKDQKALPLAQAEVF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacgaccactcccatcgatggcctcttgatcatcgagccgaccgtgttcggc
gacgaccgcggcttcttctacgagagcttcaatgcgcagcgcttcgccgacctgacgggc
gtgcgggccgacttcgtgcaggacaaccattcccgctccgcgcgcaacgtgctgcgcggg
atgcactaccagatccagcaggcgcagggcaagctggtgcgcgtcgtcagcggcagcgtg
tacgacgtggccgtcgacctgcgcaaaagctcgcccacgttcggcaggtggttcggcgtc
gagctgtcggccgagaacaagcgccagttctggattccgccgggcttcgcgcatgggttc
gcggtgaccagcgagttcgccgaattcctgtacaagaccaccgattactacgcccccgag
cacgagcgtgcgctgctgtggaacgacccggcggtgggcatcgagtggccgctggacggc
acgccgctgctgtcggccaaggaccagaaggcgctgccgctggcacaggcggaagtgttc
ccatga
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